Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g4058 ATGCTTTCCCTATTAAGCGTTTCTTTGTTTCCCCCGTCCACACAACACGGCGTCTATCGATCTTCTAAATTTGCGGCTGCAGATGCAAGGGAGATCAATTCGTTCTGTTTTAGGCAAAGAAACGAGCATAGGAAAGCTGTCTGTGCCTGTGTGTCTTCTCCGCGAAACTTGACGAGTGACGAGTCGTCGGCGATTAAATTTAATGGTTCTTCTAAATCAGAACACTTAAACACAATACGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGCAAGGAAGTCTACAAGTCTTTTGGGGAAAAGAAAATCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGCCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCTCCAGACAAGGTGTTCCAAAGTGCAGCTCTTTTTGATTCCTTGACTGTACGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGGATGTCTGATGATCAAATTTCAGAGCTTGTCAAGGAAAGCTTGGCAGCTGTTGGATTAAAGGGTGTCGAGGATCGGCTGCCTTCAGAGTTGTCTGGTGGGATGAAAAAACGAGTTGCCTTAGCTCGGTCCATTATTTATGACACTACAAATGATTCGATAGAACCAGAGGTTCTCTTGTATGATGAACCAACCGCTGGTCTGGATCCCATAGCTTCTACTGTAGTTGAGGATTTGATCCGCTCTGTTCACATAAAAGGACGTGATGCTCTTGGAAAACCTGGGAAGATTGCATCTTATGTAGTCGTCACCCACCAACATAGTACTATTAAAAGAGCTATTGACAGGTTATTATTTTTACACAAGGGTAAGATTGTTTGGGAAGGAATGACGGATGAATTTACTACATCAACAAATCCAATTGTCCAACAGTTTGCATCTGGAAGCCTGGACGGTCCCATCAGATATTAG 975 0.4256 MLSLLSVSLFPPSTQHGVYRSSKFAAADAREINSFCFRQRNEHRKAVCACVSSPRNLTSDESSAIKFNGSSKSEHLNTIRDHEDDSDVLIECKEVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKVFQSAALFDSLTVRENVGFLLYEHSRMSDDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTDEFTTSTNPIVQQFASGSLDGPIRY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g4058 324 Gene3D - 76 316 IPR027417 -
Prci3g4058 324 Pfam ABC transporter 105 234 IPR003439 GO:0005524
Prci3g4058 324 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 315 IPR003439 GO:0005524
Prci3g4058 324 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 144 324 - -
Prci3g4058 324 ProSitePatterns ABC transporters family signature. 199 213 IPR017871 GO:0005524|GO:0016887
Prci3g4058 324 SMART AAA_5 114 292 IPR003593 GO:0016887
Prci3g4058 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g4058 Prci-Chr3 48122686 48129347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g4058 89 302 Calmodulin-binding Proteins AT2G36910 27.381 1.25e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g4058 - - qsa:O6P43_007747 504.597