Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g4057 ATGCTTTCCCTATTAAGCGTTTCTTTGTTTCCCCCGTCCACACAACACGGCGTCTATCGATCTTCTAAATTTGCGGCTGCAGATGCAAGGGAGATCAATTCGTTCTGTTTTAGGCAAAGAAACGAGCATAGGAAAGCTGTCTGTGCCTGTGTGTCTTCTCCGCGAAACTTGACGAGTGACGAGTCGTCGGCGATTAAATTTAATGGTTCTTCTAAATCAGAACACTTAAACACAATACGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGCAAGGAAGTCTACAAGTCTTTTGGGGAAAAGAAAATCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGCCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTAAAAAGAGGGCTGGTTTGATAAGCGATGAAGAGATATCTGGTGTTCGGATTGGATTAGTGTTCCAAAGTGCAGCTCTTTTTGATTCCTTGACTGTACGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGGATGTCTGATGATCAAATTTCAGAGCTTGTCAAGGAAAGCTTGGCAGCTGTTGGATTAAAGGGTGTCGAGGATCGGCTGCCTTCAGAGTTGTCTGGTGGGATGAAAAAACGAGTTGCCTTAGCTCGGTCCATTATTTATGACACTACAAATGATTCGATAGAACCAGAGGTTCTCTTGTATGATGAACCAACCGCTGGTCTGGATCCCATAGCTTCTACTGTAGTTGAGGATTTGATCCGCTCTGTTCACATAAAAGGACGTGATGCTCTTGGAAAACCTGGGAAGATTGCATCTTATGTAGTCGTCACCCACCAACATAGTACTATTAAAAGAGCTATTGACAGGTTATTATTTTTACACAAGGGTAAGATTGTTTGGGAAGGAATGACGGATGAATTTACTACATCAACAAATCCAATTGTCCAACAGTTTGCATCTGGAAGCCTGGACGGTCCCATCAGATATTAG 1053 0.4255 MLSLLSVSLFPPSTQHGVYRSSKFAAADAREINSFCFRQRNEHRKAVCACVSSPRNLTSDESSAIKFNGSSKSEHLNTIRDHEDDSDVLIECKEVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRAGLISDEEISGVRIGLVFQSAALFDSLTVRENVGFLLYEHSRMSDDQISELVKESLAAVGLKGVEDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTDEFTTSTNPIVQQFASGSLDGPIRY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g4057 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Prci3g4057 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Prci3g4057 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 5 350 - -
Prci3g4057 350 SMART AAA_5 114 318 IPR003593 GO:0016887
Prci3g4057 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Prci3g4057 350 Gene3D - 76 342 IPR027417 -
Prci3g4057 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Prci3g4057 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g4057 Prci-Chr3 48122686 48129347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g4057 89 328 Calmodulin-binding Proteins AT2G36910 30.078 2.24e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g4057 - - qsa:O6P43_011318 565.459