Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g4025 ATGGCTTCTCTCTCTTGCTCCGTCGCGGACCTTGCCCCACTCCTCTTCGCTGCCTCCAACGCAACCGGTGCTGCCACCTACCTCTGTACCCAGCTCGAAGCCATATCCGCAAAGCTGAGTGAAACCACCTACGCCGTCAACAACACCTACCTTCTCTTCTCAGCGTATCTGGTGTTCGCCATGCAACTTGGTTTCGCCATGCTGTGCGCCGGTTCCGTGCGAGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTCGATGCAGCCGCCGGCGGCCTCTCTTACTATCTCTTCGGTTTTGCCTTTGCCTTCGGGTCCCCCTCCAACGGCTTCATCGGTCGCCACTTCTTTGGCCTCCGACACTTCCCTTCTCCATCCGGAGACTACAGCTTCTTCCTCTATCAATGGGCTTTCGCCATAGCAGCCGCTGGAATCACCAGCGGCTCCATCGCTGAGAGAACCCGCTTCTACTCCTCTTTTCTCACAGGTTTCGTTTACCCCATCGTTTCCCATTGGTTCTGGTCCACTGACGGGTGGGCCAGCCCCACTCTGGCCGATAGCCTTTTATTTGGATCCGGTGCCATTGACTTCGCAGGTTCGGGGGTGGTTCACATGGTGGGCGGCATAGCAGGGCTGTGGGGTGCCTATCTGGAAGGGCCAAGAATTGGGCGGTTCGACCGGACAGGCCGGTCAGTGGCCTTGAGAGGGCACAGCGCATCTCTAGTCGTGCTGGGCTCCTTCTTGTTATGGTTCGGGTGGTACGGGTTTAACCCGGGCTCATTCCTGACGATCCTGAAGGGATACAGAGGGGGCGGGAATTATTATGGTCAATGGAGTGCGATAGGCAGGACAGCCGTGACGACGACACTGGCAGGGTGCACGGCGGCGCTGACCACTTTGTTTGGAAAACGGTTAGTAGCGGGACACTGGAACGTGATAGACGTGTGCAACGGACTACTCGGGGGATTTGCAGCAATAACGTCCGGGTGCTCCGTGGTAGAGCCATGGGCGGCGATCATATGCGGCTTCGTGGCGGCATGGGTGCTGATAGGGCTGAACAAGCTGGCGGAGAGGGTGGAGTATGACGACCCCCTGGAGGCGGCGCAGCTGCACGGAGGGTGCGGGGCGTGGGGATTGCTGTTCACGGGACTGCTGGCGAAGAAAGAATACGTGGAGGAGGTGTACGGAGGAGGGAGAAAGCACGGGCTGTTGATGGGAGGGGGAGGGAGGCTGCTGGCGGCACAGGTGGTGGGGATGGCGGCGGTGTGGGGGTGGGTGACGGCGACAATGGGGCCGCTCTTCTACATGCTGAAGAAGATGAAGCTGTTGAGGATATCAAGGGAGGATGAGATGGCAGGAATGGACCTGACGAGGCATGGCGGCTTCGCCTATGCTTACGACGACCCAGACGAGAGCGTGAGGCCCGCTGGGTTCATGATGGCCAAGATCGAGCCGGCCCATTCCCTCGCCACCGCTCCCACTCCATAG 1491 0.5942 MASLSCSVADLAPLLFAASNATGAATYLCTQLEAISAKLSETTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSPSNGFIGRHFFGLRHFPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQXFYSSFLTGFVYPIVSHWFWSTDGWASPTLADSLLFGSGAIDFAGSGVVHMVGGIAGLWGAYLEGPRIGRFDRTGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKGYRGGGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRLVAGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAWVLIGLNKLAERVEYDDPLEAAQLHGGCGAWGLLFTGLLAKKEYVEEVYGGGRKHGLLMGGGGRLLAAQVVGMAAVWGWVTATMGPLFYMLKKMKLLRISREDEMAGMDLTRHGGFAYAYDDPDESVRPAGFMMAKIEPAHSLATAPTP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g4025 497 ProSitePatterns Ammonium transporters signature. 198 223 IPR018047 GO:0008519|GO:0016020|GO:0072488
Prci3g4025 497 Gene3D Ammonium transporter AmtB like domains 24 481 IPR029020 -
Prci3g4025 497 SUPERFAMILY Ammonium transporter 44 447 - -
Prci3g4025 497 NCBIfam ammonium transporter 47 466 IPR001905 GO:0008519|GO:0016020|GO:0072488
Prci3g4025 497 FunFam Ammonium transporter 28 480 - -
Prci3g4025 497 Pfam Ammonium Transporter Family 50 466 IPR024041 GO:0008519|GO:0016020|GO:0072488
Prci3g4025 497 PANTHER AMMONIUM TRANSPORTER 23 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g4025 Prci-Chr3 47870659 47872512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g4025 26 497 Inorganic Solute Cotransporters AT1G64780 78.586 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g4025 K03320 K07573 zju:107412282 811.216