Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g4024 ATGTTGAAGCTGTCTCGCTTGTTCTCTTCCAGGCATCAGATATCAGAAACACTGTTATCTCAGAAAGCTGATCTTAGAGACGCTCTATGGCTTCTGTGTGGTTGTACTACCCATTCAGCTGGCATTTCTACCGCTACAAATGACTATTCTGCTAAAGGATATACTTCAAGTCAAATATTTGTTCCATATTCTGTTTTCAAAGGCAAAGCTGCACTCTCTCTGAGTCCCCGACTTCCAACTTTCTCTAAGTTGGATTCTGGGACCATTGTTATTGATCGCCGTGGTTCAATGATGATGACTTTCATACCTGCTCTTGGTGAGCGCAAATATGACTGGAAGAAGAAACAGAGATTTGCTCTCTCAGCAACGGAAGTTGGTTCTTTGATAAGCACGGGCCCCACAGATTCCTGTGAATTCTTTCATGACCCTGCAATGTTATCAAGTAATGCTGGTCAAGTCAGGAAGAGCTTATCAATTAAGCCACATGCAGACAGCTCTGGCTACTTTATGTCTTTGTCTGTTGTGAACAACATTTTAAAAACCAAAGAATACTTGTCTGTTCCAGTCACAACTGCTGAGTTTGCTGTGATGAAGACTGCCTGTAGCTTTGCATTGCCGCGCATTATGGGTTGGGATCGTCTGGCTCATGATCAGTCCAAAGGCATGCATGGTCATCAATCAAAGGTTGACCCGCAAGTTCTAGACTTGGAGTGGGCAAAGTGA 723 0.4357 MLKLSRLFSSRHQISETLLSQKADLRDALWLLCGCTTHSAGISTATNDYSAKGYTSSQIFVPYSVFKGKAALSLSPRLPTFSKLDSGTIVIDRRGSMMMTFIPALGERKYDWKKKQRFALSATEVGSLISTGPTDSCEFFHDPAMLSSNAGQVRKSLSIKPHADSSGYFMSLSVVNNILKTKEYLSVPVTTAEFAVMKTACSFALPRIMGWDRLAHDQSKGMHGHQSKVDPQVLDLEWAK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g4024 240 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 29 240 IPR013742 GO:0003697|GO:0006355|GO:0006952
Prci3g4024 240 Gene3D Transcriptional Coactivator Pc4; Chain A 50 226 IPR009044 GO:0003677|GO:0006355
Prci3g4024 240 Pfam Whirly transcription factor 65 199 IPR013742 GO:0003697|GO:0006355|GO:0006952
Prci3g4024 240 SUPERFAMILY ssDNA-binding transcriptional regulator domain 57 218 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g4024 Prci-Chr3 47863274 47865944 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g4024 56 240 Whirly Transcription Factor Family AT1G71260 67.725 1.56e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Prci3g4024 Whirly 1.4e-56 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g4024 K26561 - qsa:O6P43_011277 343.199