Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g4023 ATGGAAAAAGCATCAGCCTCTCTTTTGTTGGCTTCTTACATCTTTGTCTCCGTTTCTGCTATCGACAGTGATTATGCGCAGTGCAATTGTGACGAAGAGGGGCTTTGGAGCATACATAACATTTTAGAGAGCCAAAGAGTTAGTGACTTCTTTATTGCCATAGCATATTTTTCGATCCCTGTTGAACTCCTCTACTTCGTTAGTCGTTCCAACCTCCCCTTCAAATGGGTGTTCCTCCAATTCATTGCATTCATAGTCCTTTGTGGCTTGACGCATTTACTTAATGCATATACTTATTACGGACCACACTCCTTTCAGTTGGTGCTCTCCCTTACAATTGCTAAACTCCTTACAGCTCTGGTCTCCTGTGCAACTGCAATTACCCTTTTTACTCTGATTCCTCTTCTTCTCAAAATCAAGGTGAGGGAGCTCTTTCTGAAGCAGAACGTGTTGGAATTAGACCAGGAGATTGGAATGATCAGAAGACAAAAAGAAGCAAGCTGGCATGTTCGTATGCTAACACGGGAAATCAGAAAGTCTCTGGATAAGCATACAATCTTGTACACCACCCTTGTTAAGCTCTCTAACTCATTGGCCTTGCATAACTGCGCTGTTTGGATGCCAAATGAGGATGGACGAGAAATGTACTTAACCCATGAGTTGAAAACAAGCTCCCCTGAGATTTTTCACTATTCTATTCCCATAAACGACCCAGATGTCTTAGAGATAATAAAAAGTAAAGGGGTAAGGATTTTGAGGCCTGAATCAGTACTAGGATCTGCAAGTAAGGGGGGGTCTGGGGAGTCAGGTGCTGTTGCAGCTATTCGTATGCCGATGCTTCATGTTTCAAATTTTAAAGGAGGGACACCTGAGTTTGTTGATACATCCTATGCTATTCTGGTTTTGGTTCTTCCAAATTCAAACTCTAGGCCTTGGAGCCACCAAGAGATGGAGATAGTGGAGGTAGTTGCTGATCAGGTCGCTGTAGCCCTGTCTCATGCAAATATTCTTGAAGAGTCTCAGCTCATGAGACAGAAACTGGCAGAGCAAAACCGAGCTTTGCAACAGGCTAAAAAGAATGCAATGATGGCTAGTCAGGCAAGGAAATCATTTCAGAAAGTGATGAGTCATGGCATGCGCAGGCCTATGCATTCAATCCTGGGCCTGCTTTCAATGTTTCAAGAGGGCAATTTGAGATCTGAGCAAAAGATTATAGTTGACACAATGATCAAAGTTGGCCATGTTCTCTCAAGTTTGATTAATGATGTAATGGAGATTTCGGTAAATGATAAAGGAAGCTTCCAGTTAGAGATGAAACCTTTCAATTTACATTTGATGATGAGAGAAACTGCTTGTATTGCTAAATGTCTGTGTGTATATAAAGGCTTTGATTTTAAAATTGAAGTGCAGAAGTCGTTGCCCGATTTGGTGATAGGGGACCAGGCAAGGGCTTTTCAAGTAATTTTGCATATGATTGACCATTTATTGAACATATATGATGGAGAAAGGACTTTCAGTGTCCAAGTTTATCTTGGAAATGATAATGGGGATAAGGACAATAATTCTTTGGGAATATGGAGATCAGGCATGCAAAATGATTGTGTATATATGAAATTTGATTTTCAGATAACTGGTACAAGTTCGCGTTCAGGTGAATCTGCTTCAGCAAGACGCTATGCTGGTGGAAGGCACTACAGCAATGAACCTAATGAGGGCCTAAGCTTCAGCATGTGCAAAACACTGGCACAGATGATGCAAGGCAATATCTGGTTATCACTGAACGCTCTAGGTTTGGCACAAAGCATGACACTTGCCCTCAAGTTTCAGATAGGGCCATCACACGGAAGATCCATTTTAGCACCTAAAGATTCTCTGGACTCTCGGTTCAGAAGCCTCAAGGTTGTGTTAGCCGACGACGACGACATAAACAGGACAGTGACGAAAAAACTTCTTGAGAAGTTGGGTTGTCAAGTAACTGCTGTTTCATCAGGGTTTGAATGCCTGGGTGCTGTAAGTGCATCTGGTAATACATTCAACGTCATCCTTTTGGATCTGCACATGCCCGAAATGGATGGTTTTGATGTGGCTATGAGAATTCGGAAGTTCCACAGCCGCAACTGGCCCTTGATTATAGCTCTTACAGCAAGTGCAGAAGAAGATGTGATGGATAGATGCCTGCGGGTTGGAATGAACGGATTAATTCGAAAACCTATTCTTCTTCAAGAGATAGCAGATGAACTAAGAAGAGCCCTGCAACACGCAGGTGAGAAATTGTGA 2277 0.4238 MEKASASLLLASYIFVSVSAIDSDYAQCNCDEEGLWSIHNILESQRVSDFFIAIAYFSIPVELLYFVSRSNLPFKWVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLVLSLTIAKLLTALVSCATAITLFTLIPLLLKIKVRELFLKQNVLELDQEIGMIRRQKEASWHVRMLTREIRKSLDKHTILYTTLVKLSNSLALHNCAVWMPNEDGREMYLTHELKTSSPEIFHYSIPINDPDVLEIIKSKGVRILRPESVLGSASKGGSGESGAVAAIRMPMLHVSNFKGGTPEFVDTSYAILVLVLPNSNSRPWSHQEMEIVEVVADQVAVALSHANILEESQLMRQKLAEQNRALQQAKKNAMMASQARKSFQKVMSHGMRRPMHSILGLLSMFQEGNLRSEQKIIVDTMIKVGHVLSSLINDVMEISVNDKGSFQLEMKPFNLHLMMRETACIAKCLCVYKGFDFKIEVQKSLPDLVIGDQARAFQVILHMIDHLLNIYDGERTFSVQVYLGNDNGDKDNNSLGIWRSGMQNDCVYMKFDFQITGTSSRSGESASARRYAGGRHYSNEPNEGLSFSMCKTLAQMMQGNIWLSLNALGLAQSMTLALKFQIGPSHGRSILAPKDSLDSRFRSLKVVLADDDDINRTVTKKLLEKLGCQVTAVSSGFECLGAVSASGNTFNVILLDLHMPEMDGFDVAMRIRKFHSRNWPLIIALTASAEEDVMDRCLRVGMNGLIRKPILLQEIADELRRALQHAGEKL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g4023 758 ProSiteProfiles Histidine kinase domain profile. 374 608 IPR005467 -
Prci3g4023 758 SMART gaf_1 182 341 IPR003018 GO:0005515
Prci3g4023 758 FunFam Ethylene receptor 630 754 - -
Prci3g4023 758 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 352 432 IPR036097 GO:0000155|GO:0007165
Prci3g4023 758 Gene3D - 431 611 IPR036890 -
Prci3g4023 758 CDD HATPase_ETR2_ERS2-EIN4-like 473 606 - -
Prci3g4023 758 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 421 592 IPR036890 -
Prci3g4023 758 SMART REC_2 632 747 IPR001789 GO:0000160
Prci3g4023 758 Gene3D - 161 332 IPR029016 -
Prci3g4023 758 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 755 - -
Prci3g4023 758 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Prci3g4023 758 Gene3D - 333 430 - -
Prci3g4023 758 FunFam Ethylene receptor 4 334 428 - -
Prci3g4023 758 Pfam GAF domain 184 331 IPR003018 GO:0005515
Prci3g4023 758 SUPERFAMILY CheY-like 629 752 IPR011006 -
Prci3g4023 758 CDD HisKA 365 427 IPR003661 GO:0000155|GO:0007165
Prci3g4023 758 PIRSF Ethylen_sen_hybr_HK 1 758 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Prci3g4023 758 Pfam His Kinase A (phospho-acceptor) domain 369 428 IPR003661 GO:0000155|GO:0007165
Prci3g4023 758 ProSiteProfiles Response regulatory domain profile. 633 751 IPR001789 GO:0000160
Prci3g4023 758 Coils Coil 744 758 - -
Prci3g4023 758 Pfam Response regulator receiver domain 634 746 IPR001789 GO:0000160
Prci3g4023 758 Coils Coil 337 367 - -
Prci3g4023 758 Gene3D - 631 757 - -
Prci3g4023 758 CDD REC_ETR-like 632 747 - -
Prci3g4023 758 SUPERFAMILY GAF domain-like 185 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g4023 Prci-Chr3 47842760 47847879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g4023 22 756 Miscellaneous Gene Families AT3G04580 62.115 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci3g4023 GAF 1e-10 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g4023 K14509 - gmx:100805023 1128.62