Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3986 ATGGCTTCCCATGCAACTCCCAATTCAAGAGTTATCAAGGCCTTCAATGCTATGAAGGACTTGGGAATTTCTAGTGATGAAGTGAAACCAGTGCTGCAAAAGCTGTTAAGATTGTATGACAAGAACTGGGAATATATTGAAGAAGATAACTATCGAACACTTATAGATGCATACTTTGAGCTTAAGGAAGATAAGGAAGCGGAAGGTAAGAGAAAAGCTCTCACTAGTGATCATGGTGGAGAAAAACAAATGCAACCATTGGCAAATAAAGATGACGTGCTTTTGTTAACTACGGACAACTCAAGACAAAAATTATCCACAAAAGATAATGAAATGCCTTTAAATACTTTTGGACAAGAAATTGTTGAAACATCTCAACCTTCGATGAGCAATACGAGACCTAAAATCATTCCTCAATTATTGAGAACAAGAATTAATGAGGTAGAAAGGATATCAAAGTTTCCTAGCATGTCTGTTACAAATAGAAGATCAAATTCAGAGAAAACATCTTCTACAAGGCATGGCGAAGGACTTGTTGATGAGCCAAGCTTTACTCTTATTCGAAGAGAAAATCTACCAAATGAACATAATAGGGGAGAGATAATGAAGCAAAAAACCAAACACAATAAGTTACATCTTGAATCCAGTTCAACAAGTTACAAAGGTTCTTATGAGGTTTTGACTAGAAATCATCCTGTCAAGTTGGTGTCTTCTTTGTATATGGATCTAAACAGTGCCATTGATGATTCTGCACACAATAACAACCCTGCAAGTAGTAAGACTAATATTGAAATTGCCTCTTCAACTTTGGGAGAAGTGAAAATTTCTTTAAACTGTGACCACGCACTTGAACAACCAAATTTCTATATTCCAAACTTAAGTACTGTGATGAAGTTCATGGAAGAGAAGTACCTTCAACCTACAAATATTGTTGGACCCCAAATTTCTATGGTGAATTTATTAAATAGTTTGTGTGAGAATTTTCTTAAATTAGGAATGCATGTGAATCAAAAGCATTCACATCCTGAGTTTAACAATGCAAATATATTAACAAATGGGCCACAACAAGCTATTGCTCAAGATGAGAAAAAGCTATTTCATTTTCTTAGTGACATAACAAAAGGCTCAGAAAAGGTGAAGATATCATTGATAGATGAGTATGGTAATGGGGAATTTCCAAATTTTAATTACACACCAAATAATATAATATATCAGAGTGCTAATGTAAATATTTCGCTGGCTCGTATTGCGGATGAAGGTTGTTGCTCAAGTTGCTTGGGAAACTGTCTTTCCCAATCATTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACGCTTCAGGGGTTATTAAAAGATGAATTTTTAATATCTTGCATATCTATGAAAAAAGAACCTCAAGCTCATCAATTGGTATATTGTCAAGAGTGTCCACTAGAGAGGTCTAAGAATGAATACATGCCTGAGCAATGTAAGGGACATCTAATCAGGAAATTCATTAAAGAATGTTGGAAGAAGTGTGGATGTGACATGCAATGCGGAAATCGTATAGTGCAACGAGGTTTAAGATGTAAATTGCAGGTGTTCTTTACTAGTGAAAAAAAGGGTTGGGGCCTTAGAACACTGGAAGATTTGCCTAAAGGATCCTTTATATGTGAATATGCTGGAGAAATATTAACTAACATGGAGTTGTATGAAAGAATTGTGCACAAAAATGGAAATGACAGGCATACATATCCCGTAACACTTGATGCAGATTGGGGCTCAGAAGGGGCATTAAAAGATGAGGAGGCATTGTGTCTAGATGCCACATATAATGGAAATGTTGCTAGGTTTATCAATCATAGATGCTCAGATGCAACTCTAATAGACATTCCTGTTGAAGTAGAGACTCCTGATCGTCATTATTACCATCTTGCCTTCTTTACTAACAGGAAAGTGAATGCTTATGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCATGATCATCCTATCAAAGCATTCCAATGTTGCTGTGGAAGCCCATTCTGTCGTGACAAGAAGCGGAAAGGGAAGCGAAAATTAGCGAAATGTCTATGA 2097 0.3639 MASHATPNSRVIKAFNAMKDLGISSDEVKPVLQKLLRLYDKNWEYIEEDNYRTLIDAYFELKEDKEAEGKRKALTSDHGGEKQMQPLANKDDVLLLTTDNSRQKLSTKDNEMPLNTFGQEIVETSQPSMSNTRPKIIPQLLRTRINEVERISKFPSMSVTNRRSNSEKTSSTRHGEGLVDEPSFTLIRRENLPNEHNRGEIMKQKTKHNKLHLESSSTSYKGSYEVLTRNHPVKLVSSLYMDLNSAIDDSAHNNNPASSKTNIEIASSTLGEVKISLNCDHALEQPNFYIPNLSTVMKFMEEKYLQPTNIVGPQISMVNLLNSLCENFLKLGMHVNQKHSHPEFNNANILTNGPQQAIAQDEKKLFHFLSDITKGSEKVKISLIDEYGNGEFPNFNYTPNNIIYQSANVNISLARIADEGCCSSCLGNCLSQSLPCACAQETGGEFAYTLQGLLKDEFLISCISMKKEPQAHQLVYCQECPLERSKNEYMPEQCKGHLIRKFIKECWKKCGCDMQCGNRIVQRGLRCKLQVFFTSEKKGWGLRTLEDLPKGSFICEYAGEILTNMELYERIVHKNGNDRHTYPVTLDADWGSEGALKDEEALCLDATYNGNVARFINHRCSDATLIDIPVEVETPDRHYYHLAFFTNRKVNAYEELTWDYGIDFDDHDHPIKAFQCCCGSPFCRDKKRKGKRKLAKCL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3986 698 Pfam Ubiquitin-binding WIYLD domain 9 63 IPR018848 -
Prci3g3986 698 SMART set_7 527 667 IPR001214 GO:0005515
Prci3g3986 698 Gene3D SET domain 372 686 IPR046341 -
Prci3g3986 698 Pfam SET domain 539 661 IPR001214 GO:0005515
Prci3g3986 698 CDD SET_SETDB-like 393 661 - -
Prci3g3986 698 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 693 IPR025776 -
Prci3g3986 698 SMART preset_2 369 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g3986 698 Gene3D - 2 64 IPR043017 -
Prci3g3986 698 ProSiteProfiles SET domain profile. 527 661 IPR001214 GO:0005515
Prci3g3986 698 MobiDBLite consensus disorder prediction 158 178 - -
Prci3g3986 698 FunFam SET-domain containing protein lysine methyltransferase family protein 372 686 - -
Prci3g3986 698 ProSiteProfiles Pre-SET domain profile. 421 524 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g3986 698 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 9 695 - -
Prci3g3986 698 MobiDBLite consensus disorder prediction 66 86 - -
Prci3g3986 698 Pfam Pre-SET motif 372 519 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci3g3986 698 SUPERFAMILY SET domain 379 684 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3986 Prci-Chr3 47622340 47632157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3986 503 684 C2H2 Transcription Factor Family AT2G23740 39.572 4.24e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci3g3986 Pre-SET 6.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3986 - - gsj:114402909 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3986 3 47622340 47632157 Prci3g3986 3 47622340 47632157 CCT
Prci3g3986 3 47622340 47632157 Prci1g2564 1 45364753 45370863 CCT
Prci3g3986 3 47622340 47632157 Prci3g3986 3 47622340 47632157 ECH