Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3981 ATGGTGATTCCATATTGCCATCTGCAGGGGACACCAGTGAATATTATTGTAGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATCGATGGAGTGGTATCAAAAATCACTGGAAAAGATGCAGAAATTGAAACTCCTGATGGAAAAAAGGTTGTTGCAAAATTATCAAAAATATATCCCAAAGATATGGAAGCTCCAGCTGGTGGAGTGGATGACATGACTAAGCTGTCCTATTTGCACGAGCCTGGGGTCCTGCAGAACTTAAAAGCTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATCGCAATAAACCCATTCCAAAGACTGCCTCATATCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCATTTGGAGAACTAAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTAATGAAGGAAAAAGCAATTCAATTCTTGTCAGCGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTAGGTGGTAGGGCTGCTACTGAAGGGAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGCTTTGGAAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCAATTCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCGCAGGAGGAAATTGAGAAATACAAATTAGGACCTCCTAAATCATTTCATTACCTTAACCAGTCAAATTGTTATGAACTGGTTGATTCAAGTAATGCTCGTGAGTATCTTGCAACCAGGAGAGCCATGGACATTGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGTTTTTGCCAAAGGAAAAGATGTTGACTCATCAATTCCCAAAGATGACAAAGCCAAATTCCACCTGGCAACAACTGCTGAGCTTCTCATGTGTAATGCTGGTGCCTTGGAAGATGCTTTATGTAAACGTGTGATGATCACCCCTGAAGAAGTAATAAAGCGAAGCCTTGATCCCCAAAGTGCAGCAATAAGTAGAGATGGCTTGGCTAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGATAAGATTAATAATTCAATCGGACAAGATCCTAATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGCTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTAATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCGAAGTCAACACATGAAACATTTGCTAACAAGCTCTATCAAACGTTCAAGAATCACAAGCGCTTTATAAAGCCAAAATTGTCTCGATCAGATTTCACAATTTCTCATTATGCTGGGGAGGTCTTATACCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGGACTTTTTCCTCCACTTCCAGAAGAGACATCTAAGTCTTCCAAATTTTCTTCAATTGCATCTCGTTTTAAGCTACAACTACAGTCACTAATGGATACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCAAACATCATGCAACAACTTCGATGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTCCTTTTTTTGAATTTATAAATCGATTTGGCCTCCTTGCCCCAGAGGCCGTGGAAGGCAACATTGAAGAAAAGGTTGCTTGCCAAAAAATTCTGGAAAAGATGGGGCTAAAAGGGTATCAGATTGGTAAAACAAAGGTATTCTTGAGAGCTGGTCAGATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTCAGCAATGCAGCAAAAATTATCCAACGGCGCATACGAACCCATCAAGCTCGTAATCATTATCTTTCTTTGCGAATGACTACCATATACATGCAATCTGTGTGTAGAGGGAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTTCTAGGAAAATTCAGAAGAATGTACGCCGATATGAAGTTAGGAAGGCCTATAAAAGACTCCATGCAACAGCATTAACCTTGCAGACGGGTTTAAGGGCAATGGCTGCACGTAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCCATTGCTATTCAGGCTCGGTGGAGATGCCACAAAGCTTCCTCATATTATAAGAGGCTCAAAAGAGCTGCAGTAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCTGCGAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACGAACCTGGAAGAAGCCAAAGCACAAGAGGCAGCAAAACTTCAGAATTCATTGAAGGAGATGCAGGCCAAAGTTGATGAAACCAATGCTTTACTTATCAAAGAGCGAGAGAATGCAAAGAAAGTTATTGAAGAAGCACCTCCTGTTATTCAGGAAACCCAGGTTGTTGTTGAAGACACACAAAAAATTGAATCACTAACAGCAGAAGTTGAGGGCCTGAAGACCTCACTCCAGTCAGAAAAAGAGAGAGCAGATGACTTTGAAAGAAAATACAATGAAGCCCAAGTCTGTAGTGAAGAAAAGGGTAAAAAATTAGAGGACACAGAGAAAAAGGTTCGTCAGCTACAGGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAGTCGGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGATCCAGATCTATTATTCAGAGAGGTGCTGAAGGTGGAGGTCATGTTGGAGGTGAAGCAAGGGCACCCTTGGATCTTCATAGCCCATCCATGATTCAGAGGGAACACTATGAAATGGAGGATAGGCCACAAAAGTCACTAAATGAGAAACAGCAGGAGAATCAAGAATTACTCATCAGATGTGTTGCACAACATCTAGGCTTTGCTGGAAACAGACCAATTGCTGCCTGTATCATATATAAATGCCTCTTGCACTGGCGATCATTTGAAGTAGAGCGTACTAGCGTTTTTGATCGTATTATTCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATATCTTGGCTTACTGGTTATCGAACGCCTCGACACTTCTCTTGCTACTCCAGCGCACACTCAAAGCAAGTGGTGCCGCTGGAATTGCTCCGCAACGCCGTCGTTCTTCATCAGCAACACTATTTGGGAGGATGACACAAAGTTTCCGCGGAGCTCCATCCGGAGTCAACCTTGCCCTAATCAACGGTACTGGTGGAGTTGATACATTACGACAAGTTGAAGCCAAGTACCCAGCTCTTCTTTTCAAACAGCAGCTTACGGCATATGTGGAAAAGATATATGGAATGATCCGAGATAACTTGAAGAAAGAAATATCTCCCTTGCTTGGGTTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAAGGATCACGCTCGGTTGCAAACACGGAAGCCCAGCGAGCATTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTTCTCAATACTTTAAAAGCAAATCATGTTCCTCCATTCTTAGTTCGGAAGGTGTTCACTCAAATATTTTCTTTCATTAATGTGCAGCTTTTCAACAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCACTGGTGTTACAAAGCAACGGATGAGTATGCAGGTTTATCCTGGGATGAGCTCAAACATATTAGGCAGGCTATAGGATTTCTGGTCATACATCAGAAACCGAAGAAAACGCTGGATGAAATAAGTCATGACCTGTGCCCTGTCCTCAGTATACAGCAACTATATCGGATTAGTACCATGTACTGGGATGACAAGTATGGCACGCATAGCGTGTCCCCCGATGTAATATCCAATATGAGAGTGCTGATGACTGAAGATTCGAATAATGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCCAGTATTCCATTTTCGGTTGATGACATATCAAAGTCAATGGAGCAAATAAATATTGCGGATATTGAACCCCCACCACTGATTCGAGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCATAGATTGA 4611 0.4144 MVIPYCHLQGTPVNIIVGSHVWVEDPDVSWIDGVVSKITGKDAEIETPDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGPPKSFHYLNQSNCYELVDSSNAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIVFAKGKDVDSSIPKDDKAKFHLATTAELLMCNAGALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRSDFTISHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIASRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFGLLAPEAVEGNIEEKVACQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRIRTHQARNHYLSLRMTTIYMQSVCRGRLACKLFDNMRKVAASRKIQKNVRRYEVRKAYKRLHATALTLQTGLRAMAARKEFRFRKQSKAAIAIQARWRCHKASSYYKRLKRAAVTTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEAAKLQNSLKEMQAKVDETNALLIKERENAKKVIEEAPPVIQETQVVVEDTQKIESLTAEVEGLKTSLQSEKERADDFERKYNEAQVCSEEKGKKLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRGAEGGGHVGGEARAPLDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGIAPQRRRSSSATLFGRMTQSFRGAPSGVNLALINGTGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQINIADIEPPPLIRENSGFSFLLPRID 1536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3981 1536 SMART MYSc_2a 65 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 ProSiteProfiles IQ motif profile. 862 891 IPR000048 GO:0005515
Prci3g3981 1536 FunFam Myosin 2 320 434 - -
Prci3g3981 1536 ProSiteProfiles IQ motif profile. 814 843 IPR000048 GO:0005515
Prci3g3981 1536 FunFam Class V myosin 447 583 - -
Prci3g3981 1536 FunFam unconventional myosin-Va 745 792 - -
Prci3g3981 1536 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 FunFam Myosin heavy chain 260 315 - -
Prci3g3981 1536 Gene3D - 447 631 - -
Prci3g3981 1536 Pfam IQ calmodulin-binding motif 864 883 IPR000048 GO:0005515
Prci3g3981 1536 Pfam IQ calmodulin-binding motif 745 763 IPR000048 GO:0005515
Prci3g3981 1536 Pfam IQ calmodulin-binding motif 841 860 IPR000048 GO:0005515
Prci3g3981 1536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 891 IPR027417 -
Prci3g3981 1536 SMART iq_5 861 883 IPR000048 GO:0005515
Prci3g3981 1536 SMART iq_5 838 860 IPR000048 GO:0005515
Prci3g3981 1536 SMART iq_5 742 764 IPR000048 GO:0005515
Prci3g3981 1536 SMART iq_5 813 835 IPR000048 GO:0005515
Prci3g3981 1536 SMART iq_5 790 812 IPR000048 GO:0005515
Prci3g3981 1536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 793 IPR027417 -
Prci3g3981 1536 Gene3D Myosin VI head, motor domain, U50 subdomain 320 609 - -
Prci3g3981 1536 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 PRINTS Myosin heavy chain signature 490 518 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 Pfam Myosin head (motor domain) 72 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 CDD MyosinXI_CBD 1120 1502 IPR037975 GO:0007015
Prci3g3981 1536 Gene3D - 675 738 - -
Prci3g3981 1536 Gene3D Kinesin motor domain 73 670 IPR036961 -
Prci3g3981 1536 ProSiteProfiles Myosin motor domain profile. 70 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 ProSiteProfiles IQ motif profile. 743 770 IPR000048 GO:0005515
Prci3g3981 1536 FunFam unconventional myosin-Va 841 889 - -
Prci3g3981 1536 PANTHER MYOSIN 62 1467 - -
Prci3g3981 1536 Gene3D - 794 840 - -
Prci3g3981 1536 Gene3D - 841 890 - -
Prci3g3981 1536 Gene3D - 743 793 - -
Prci3g3981 1536 Coils Coil 983 1059 - -
Prci3g3981 1536 Gene3D - 260 318 - -
Prci3g3981 1536 ProSiteProfiles Dilute domain profile. 1169 1479 IPR002710 -
Prci3g3981 1536 Pfam Myosin N-terminal SH3-like domain 17 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci3g3981 1536 SMART DIL_2 1354 1461 IPR002710 -
Prci3g3981 1536 Coils Coil 885 958 - -
Prci3g3981 1536 Pfam DIL domain 1355 1458 IPR002710 -
Prci3g3981 1536 FunFam unconventional myosin-Va 793 840 - -
Prci3g3981 1536 CDD MYSc_Myo11 84 728 IPR036018 -
Prci3g3981 1536 ProSiteProfiles IQ motif profile. 791 820 IPR000048 GO:0005515
Prci3g3981 1536 ProSiteProfiles IQ motif profile. 839 868 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3981 Prci-Chr3 47592296 47603945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3981 10 1536 Myosins gene family AT1G54560 84.228 0.0 2707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3981 K10357 - gmx:100816792 2713.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3981 3 47592296 47603945 Prci3g3145 3 42690083 42707761 CCT
Prci3g3981 3 47592296 47603945 Prci3g3981 3 47592296 47603945 ECH