Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3980 ATGGGGACACCAGTGAATATTATTGTAGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATCGATGGAGTGGTATCAAAAATCACTGGAAAAGATGCAGAAATTGAAACTCCTGATGGAAAAAAGGTTGTTGCAAAATTATCAAAAATATATCCCAAAGATATGGAAGCTCCAGCTGGTGGAGTGGATGACATGACTAAGCTGTCCTATTTGCACGAGCCTGGGGTCCTGCAGAACTTAAAAGCTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATCGCAATAAACCCATTCCAAAGACTGCCTCATATCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCATTTGGAGAACTAAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTAATGAAGGAAAAAGCAATTCAATTCTTGTCAGCGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTAGGTGGTAGGGCTGCTACTGAAGGGAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAATAACAACTCCAGCCGCTTTGGAAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCAATTCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTCTATCTTCTTTGTGCTGCACCGCAGGAGGAAATTGAGAAATACAAATTAGGACCTCCTAAATCATTTCATTACCTTAACCAGTCAAATTGTTATGAACTGGTTGATTCAAGTAATGCTCGTGAGTATCTTGCAACCAGGAGAGCCATGGACATTGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGTTTTTGCCAAAGGAAAAGATGTTGACTCATCAATTCCCAAAGATGACAAAGCCAAATTCCACCTGGCAACAACTGCTGAGCTTCTCATGTGTAATGCTGGTGCCTTGGAAGATGCTTTATGTAAACGTGTGATGATCACCCCTGAAGAAGTAATAAAGCGAAGCCTTGATCCCCAAAGTGCAGCAATAAGTAGAGATGGCTTGGCTAAAACAATTTATTCTCGGCTATTTGACTGGCTGGTGGATAAGATTAATAATTCAATCGGACAAGATCCTAATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGCTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTAATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCGAAGTCAACACATGAAACATTTGCTAACAAGCTCTATCAAACGTTCAAGAATCACAAGCGCTTTATAAAGCCAAAATTGTCTCGATCAGATTTCACAATTTCTCATTATGCTGGGGAGGTCTTATACCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGGACTTTTTCCTCCACTTCCAGAAGAGACATCTAAGTCTTCCAAATTTTCTTCAATTGCATCTCGTTTTAAGCTACAACTACAGTCACTAATGGATACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCAAACATCATGCAACAACTTCGATGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTCCTTTTTTTGAATTTATAAATCGATTTGGCCTCCTTGCCCCAGAGGCCGTGGAAGGCAACATTGAAGAAAAGGTTGCTTGCCAAAAAATTCTGGAAAAGATGGGGCTAAAAGGGTATCAGATTGGTAAAACAAAGGTATTCTTGAGAGCTGGTCAGATGGCTGAACTGGATGCACGGAGAGCTCAAGTACTCAGCAATGCAGCAAAAATTATCCAACGGCGCATACGAACCCATCAAGCTCGTAATCATTATCTTTCTTTGCGAATGACTACCATATACATGCAATCTGTGTGTAGAGGGAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTTCTAGGAAAATTCAGAAGAATGTACGCCGATATGAAGTTAGGAAGGCCTATAAAAGACTCCATGCAACAGCATTAACCTTGCAGACGGGTTTAAGGGCAATGGCTGCACGTAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCCATTGCTATTCAGGCTCGGTGGAGATGCCACAAAGCTTCCTCATATTATAAGAGGCTCAAAAGAGCTGCAGTAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCTGCGAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAACTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACGAACCTGGAAGAAGCCAAAGCACAAGAGGCAGCAAAACTTCAGAATTCATTGAAGGAGATGCAGGCCAAAGTTGATGAAACCAATGCTTTACTTATCAAAGAGCGAGAGAATGCAAAGAAAGTTATTGAAGAAGCACCTCCTGTTATTCAGGAAACCCAGGTTGTTGTTGAAGACACACAAAAAATTGAATCACTAACAGCAGAAGTTGAGGGCCTGAAGACCTCACTCCAGTCAGAAAAAGAGAGAGCAGATGACTTTGAAAGAAAATACAATGAAGCCCAAGTCTGTAGTGAAGAAAAGGGTAAAAAATTAGAGGACACAGAGAAAAAGGTTCGTCAGCTACAGGAATCATTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAGTCGGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACGATCCAGATCTATTATTCAGAGAGGTGCTGAAGGTGGAGGTCATGTTGGAGGTGAAGCAAGGGCACCCTTGGATCTTCATAGCCCATCCATGATTCAGAGGGAACACTATGAAATGGAGGATAGGCCACAAAAGTCACTAAATGAGAAACAGCAGGAGAATCAAGAATTACTCATCAGATGTGTTGCACAACATCTAGGCTTTGCTGGAAACAGACCAATTGCTGCCTGTATCATATATAAATGCCTCTTGCACTGGCGATCATTTGAAGTAGAGCGTACTAGCGTTTTTGATCGTATTATTCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATATCTTGGCTTACTGGTTATCGAACGCCTCGACACTTCTCTTGCTACTCCAGCGCACACTCAAAGCAAGTGGTGCCGCTGGAATTGCTCCGCAACGCCGTCGTTCTTCATCAGCAACACTATTTGGGAGGATGACACAAAGTTTCCGCGGAGCTCCATCCGGAGTCAACCTTGCCCTAATCAACGGTACTGGTGGAGTTGATACATTACGACAAGTTGAAGCCAAGTACCCAGCTCTTCTTTTCAAACAGCAGCTTACGGCATATGTGGAAAAGATATATGGAATGATCCGAGATAACTTGAAGAAAGAAATATCTCCCTTGCTTGGGTTATGCATCCAGGCACCGAGAACATCCAGAGCAAGCTTGGTTAAAGGATCACGCTCGGTTGCAAACACGGAAGCCCAGCGAGCATTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTTCTCAATACTTTAAAAGCAAATCATGTTCCTCCATTCTTAGTTCGGAAGGTGTTCACTCAAATATTTTCTTTCATTAATGTGCAGCTTTTCAACAGTCTTCTTTTAAGACGGGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCACTGGTGTTACAAAGCAACGGATGAGTATGCAGGTTTATCCTGGGATGAGCTCAAACATATTAGGCAGGCTATAGGATTTCTGGTCATACATCAGAAACCGAAGAAAACGCTGGATGAAATAAGTCATGACCTGTGCCCTGTCCTCAGTATACAGCAACTATATCGGATTAGTACCATGTACTGGGATGACAAGTATGGCACGCATAGCGTGTCCCCCGATGTAATATCCAATATGAGAGTGCTGATGACTGAAGATTCGAATAATGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCCAGTATTCCATTTTCGGTTGATGACATATCAAAGTCAATGGAGCAAATAAATATTGCGGATATTGAACCCCCACCACTGATTCGAGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCATAGATTGA 4587 0.4142 MGTPVNIIVGSHVWVEDPDVSWIDGVVSKITGKDAEIETPDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKARYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGPPKSFHYLNQSNCYELVDSSNAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIVFAKGKDVDSSIPKDDKAKFHLATTAELLMCNAGALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRSDFTISHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIASRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFGLLAPEAVEGNIEEKVACQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRIRTHQARNHYLSLRMTTIYMQSVCRGRLACKLFDNMRKVAASRKIQKNVRRYEVRKAYKRLHATALTLQTGLRAMAARKEFRFRKQSKAAIAIQARWRCHKASSYYKRLKRAAVTTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEAAKLQNSLKEMQAKVDETNALLIKERENAKKVIEEAPPVIQETQVVVEDTQKIESLTAEVEGLKTSLQSEKERADDFERKYNEAQVCSEEKGKKLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRGAEGGGHVGGEARAPLDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGIAPQRRRSSSATLFGRMTQSFRGAPSGVNLALINGTGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQINIADIEPPPLIRENSGFSFLLPRID 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3980 1528 FunFam Myosin heavy chain 252 307 - -
Prci3g3980 1528 ProSiteProfiles Dilute domain profile. 1161 1471 IPR002710 -
Prci3g3980 1528 SMART DIL_2 1346 1453 IPR002710 -
Prci3g3980 1528 CDD MYSc_Myo11 76 720 IPR036018 -
Prci3g3980 1528 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Prci3g3980 1528 FunFam unconventional myosin-Va 785 832 - -
Prci3g3980 1528 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Prci3g3980 1528 FunFam Myosin 2 312 426 - -
Prci3g3980 1528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 785 IPR027417 -
Prci3g3980 1528 Gene3D Kinesin motor domain 65 662 IPR036961 -
Prci3g3980 1528 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Prci3g3980 1528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Prci3g3980 1528 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Prci3g3980 1528 Gene3D - 667 730 - -
Prci3g3980 1528 Pfam DIL domain 1347 1450 IPR002710 -
Prci3g3980 1528 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 FunFam unconventional myosin-Va 833 881 - -
Prci3g3980 1528 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Prci3g3980 1528 Gene3D - 439 623 - -
Prci3g3980 1528 Gene3D - 252 310 - -
Prci3g3980 1528 CDD MyosinXI_CBD 1112 1494 IPR037975 GO:0007015
Prci3g3980 1528 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 Gene3D - 786 832 - -
Prci3g3980 1528 Gene3D - 735 785 - -
Prci3g3980 1528 Gene3D - 833 882 - -
Prci3g3980 1528 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Prci3g3980 1528 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Prci3g3980 1528 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Prci3g3980 1528 PANTHER MYOSIN 54 1459 - -
Prci3g3980 1528 SMART iq_5 782 804 IPR000048 GO:0005515
Prci3g3980 1528 SMART iq_5 734 756 IPR000048 GO:0005515
Prci3g3980 1528 SMART iq_5 853 875 IPR000048 GO:0005515
Prci3g3980 1528 SMART iq_5 830 852 IPR000048 GO:0005515
Prci3g3980 1528 SMART iq_5 805 827 IPR000048 GO:0005515
Prci3g3980 1528 Coils Coil 877 950 - -
Prci3g3980 1528 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci3g3980 1528 Coils Coil 975 1051 - -
Prci3g3980 1528 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Prci3g3980 1528 FunFam unconventional myosin-Va 737 784 - -
Prci3g3980 1528 FunFam Class V myosin 439 575 - -
Prci3g3980 1528 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3980 Prci-Chr3 47591249 47603945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3980 1 1528 Myosins gene family AT1G54560 84.238 0.0 2711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3980 K10357 - gmx:100816792 2715.26