Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3949 ATGGATAGGGTGTTTTCGGTGGATGAAATATCCGATCAGTTCTGGTCGCCGCCGATGTCCACCGGAACCCATGAACCCTCCAAGATGAACCGCAGCGCCTCCGAGTGGGCCTTCCAGCGCTTCCTTCAGGAAGCTTCTGTTCCCTCCCCGACCTCTCCGGCCTCTTCTTCCTTTCCTCCTCACCGTAACGATGACCCTTCGCTTCATATCAAGGATCAACCTAAACAGGATCCCGCTCTGAATACGGGGGTCACGCCACTGCAGCCCAATGTGCCTTCTCCCGCTCCTTCTATTCCTAAAATTCCCGTCAATTCCGATGACTACCAGGCTTACCTCAAGACCAAACTCAATCTCGCCTGTGCGGCCGTCGCATTGTCTCGGGGATCTTTAGGCAAAGCTCAAGATTCAGCTCCTTTTGTTGACAGTGGATCACAGGCTTCTGATTCTTCTCAAGTCGGACCTCAGGCTACTTTTAAAGGATCTGGTATATCTGGTCCATATGGAAGTGATCCATCTAAATTACTAGATAAAGATACGAAAGCACCAGTTGGAATTCCTTCCTTACCTGTGATCCAAAAGAAGCCTGCTATTGCAAACAAGCCAACAACAAGTGGATCCTCAAGGGAGCTGTCGGATGATGATGATGTTGAGGGAGAAACGGAGATGACTGAAAATATGGACCCTGCTGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAATCTGCTAGGCGTTCAAGAAGGAGAAAGCAGGCTCATTTAACTGAGCTCGAGACACAGGTTTCTCAATTAAGAGTTGAAAATTCATCCTTGTTAAAGCGTCTTACTGATGTAAGCCATAAGTACAATGAATCTGGTGTTGACAACAGAGTATTAAAAGCTGACATTGAAACATTGAGAGCAAAGGTGAAGATGGCTGAAGAGACTGTCAAAAGAATTACTGGATTGAACCCAATGTTTCATGCCATGTCCGAGATATCATCAATGGGTATCTCTTCATTTGATGGGAGCCCTCCAGACACGTCAGCAGATGCAGCTGTTCCTGTGCAAGATGATCCAATCCATCACTTTTATCAACCTTCGAATACTCCTTTGTCCAGTCATGATCTGGGAGTGAACAATGGATTGGGGGATGTTTGTTCAAATGAAAATGGTCAGCTGAGCAGGGCAGCTGTGGTAGCCGGGAACAGGATGGGACAAACAGCTTCCCTTCAGCGGGTGGCTAGCTTGGAACATCTGCAGAAGAGAATTTGTGGTGGTGCAGATTCATCTGGACCTTCTTCCAGTGGAGATCATTAG 1302 0.4739 MDRVFSVDEISDQFWSPPMSTGTHEPSKMNRSASEWAFQRFLQEASVPSPTSPASSSFPPHRNDDPSLHIKDQPKQDPALNTGVTPLQPNVPSPAPSIPKIPVNSDDYQAYLKTKLNLACAAVALSRGSLGKAQDSAPFVDSGSQASDSSQVGPQATFKGSGISGPYGSDPSKLLDKDTKAPVGIPSLPVIQKKPAIANKPTTSGSSRELSDDDDVEGETEMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDVSHKYNESGVDNRVLKADIETLRAKVKMAEETVKRITGLNPMFHAMSEISSMGISSFDGSPPDTSADAAVPVQDDPIHHFYQPSNTPLSSHDLGVNNGLGDVCSNENGQLSRAAVVAGNRMGQTASLQRVASLEHLQKRICGGADSSGPSSSGDH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3949 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 235 250 IPR004827 GO:0003700|GO:0006355
Prci3g3949 433 Coils Coil 241 275 - -
Prci3g3949 433 Pfam Basic leucine-zipper C terminal 299 422 IPR020983 -
Prci3g3949 433 MobiDBLite consensus disorder prediction 1 103 - -
Prci3g3949 433 SUPERFAMILY Leucine zipper domain 232 281 IPR046347 GO:0003700|GO:0006355
Prci3g3949 433 Coils Coil 290 317 - -
Prci3g3949 433 FunFam BZIP transcription factor 230 281 - -
Prci3g3949 433 CDD bZIP_plant_GBF1 233 284 IPR045314 GO:0003700|GO:0006355
Prci3g3949 433 MobiDBLite consensus disorder prediction 138 158 - -
Prci3g3949 433 MobiDBLite consensus disorder prediction 133 226 - -
Prci3g3949 433 Gene3D - 231 285 - -
Prci3g3949 433 MobiDBLite consensus disorder prediction 13 62 - -
Prci3g3949 433 PANTHER BASIC LEUCINE ZIPPER 63 1 422 - -
Prci3g3949 433 SMART brlzneu 228 292 IPR004827 GO:0003700|GO:0006355
Prci3g3949 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 230 285 IPR004827 GO:0003700|GO:0006355
Prci3g3949 433 Pfam bZIP transcription factor 231 282 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3949 Prci-Chr3 47511802 47515693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3949 1 321 bZIP Transcription Factor Family AT4G02640 41.691 7.54e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci3g3949 bZIP_C 1.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3949 K25784 - qsa:O6P43_007630 520.776