Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3937 ATGGAGAAGGCGAGCAAATGGATAAGAAACCATCTCATGGGGAAAAAGGAAGCGAAATATAAGGTGGACAGGTCCTACAATGAGAACAACATTGCTGAAAGTCCCAAAGTGAAGCGCAGGTGGAGCCTTGGAAGAAAGTCAAGCACCAGAACGACAGGGAACGCAACTGCGCATAGATTTTCCGCTTCTTTTGATTCAAGCTACTCTGCTAACCTCCAAGTACAATCGCTTCTGCAAACCGACGCTCCATACATTCTTTCAACTTGTCTACTACCAAAGGCTCCTACAAACATTGAAAGCTCTGCTGCTACCAAGATTCAGGCTGCTTTTCGCTCCTATTTGGCGAGGAAAGCATTGCTTGCTTTGAGGGGACTAGTGAAGATACAGGCACAAGTAAGAGGCCATCTTGTAAGGAAACAAACAAGCGCTACACTGCGAGGCATGCATGCCTTGATGGCTATTCAAGTAAGAGCCAGAATTCAAAGACTTCAGACCGCACAAGAAGCTAATCTGCTGCTTCCAAAATACTCACCCCCACATCCTCAAATTTCTCGGGATATGGTTTCTGGTATTACACCATCTACTGCACAAGAATCTAAAGACCCAAAGGATATGGACCTAAAAGAAATGTTGGAAATCATGGGAAGTAGAAGTGGTCCTCTAGATCCTTCAGATACAGAGCATGCTGTCATGTCATTCTATCCAAAGGAAAAATATCAGTACCAGGATCATGCGTTAAACGCAGAACCAAGCAGCTCAAGAAACAGCTTATCAAGTAACCAGCGCCATTCAATGTCACGGGCACCCAATGGCCTCACTAGGACGGAATCTTCGAGAGCTAAAGCAAGGTCTTGCAGTGAACCAAAACAACGACCCGTACAAGGTACAAGGCGCAAAAACAAGCCCGTAGAATCTACAAAGGACTTGAATTTTTCATTGGATGGTCGAAGGCAATCTATGTCCTCGAACTCCTTACGCTTTATCTACCATGGAAACGAGGACCATTGGGTTATGAACCATTACGAGTCATCCACGGACAGCAAAAGTGGGTCCTTCCACGGCAGCACGGCGACTAGTAATTCTTGTTATTGA 1092 0.4533 MEKASKWIRNHLMGKKEAKYKVDRSYNENNIAESPKVKRRWSLGRKSSTRTTGNATAHRFSASFDSSYSANLQVQSLLQTDAPYILSTCLLPKAPTNIESSAATKIQAAFRSYLARKALLALRGLVKIQAQVRGHLVRKQTSATLRGMHALMAIQVRARIQRLQTAQEANLLLPKYSPPHPQISRDMVSGITPSTAQESKDPKDMDLKEMLEIMGSRSGPLDPSDTEHAVMSFYPKEKYQYQDHALNAEPSSSRNSLSSNQRHSMSRAPNGLTRTESSRAKARSCSEPKQRPVQGTRRKNKPVESTKDLNFSLDGRRQSMSSNSLRFIYHGNEDHWVMNHYESSTDSKSGSFHGSTATSNSCY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3937 363 MobiDBLite consensus disorder prediction 343 363 - -
Prci3g3937 363 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Prci3g3937 363 SMART iq_5 121 142 IPR000048 GO:0005515
Prci3g3937 363 SMART iq_5 98 120 IPR000048 GO:0005515
Prci3g3937 363 MobiDBLite consensus disorder prediction 247 317 - -
Prci3g3937 363 MobiDBLite consensus disorder prediction 280 305 - -
Prci3g3937 363 Gene3D - 99 152 - -
Prci3g3937 363 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Prci3g3937 363 Pfam Protein of unknown function (DUF4005) 257 322 IPR025064 -
Prci3g3937 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 141 IPR027417 -
Prci3g3937 363 MobiDBLite consensus disorder prediction 247 279 - -
Prci3g3937 363 PANTHER IQ-DOMAIN 5-RELATED 1 321 - -
Prci3g3937 363 Pfam IQ calmodulin-binding motif 126 140 IPR000048 GO:0005515
Prci3g3937 363 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3937 Prci-Chr3 47463360 47466452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3937 1 292 IQD Protein Family AT4G14750 33.227 3.08e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3937 - - pcin:129305208 703.36