Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3935 ATGTTCGATGGAGCGCCAGAGCAGTTCCACCATCTCATAGCTCCCAGAAACTCATCACTTCCCTTCCCTCCTTTCGATGCGCATAACCCTTCTCCTCATCATCATCTCTTGTCCCCGTTGCACCACAAGGATGAAGAACGCGAGCAGGAAGAAGCTTGCACCAACTTGGAGATTCATGGAAGACAACCACAACCGGCCCAGCATGAGCTCCTCGATTCCCCCTGGACCGACGATGAAGTGCTTGCTCTTCTGAGGATCCGATCTAGCCTCGACGCTTGGTTCCCTGAACTCACCTGGCAACATGTTTCGAGGAAGCTTGTAGACCTTGGATTCAAAAGGAGCGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAACTAGCTACTTGAACAACATTCATTACACTAAGAACAACAGTTGTCACTTTATTAGTGAGCTCGAACAGCTTTACCAGCCACAGCAAGCGCATCAAATCCCCAGGGTCGAAGTTGAGGTTAGGTGTCACGAGAGCAAGCAGCCATCAGAAAAGTTGACTGATCAAGAACTACATAGCAAGACAGATCATACTGTAGAAGATGGCCCCAAAAACGATGCAACACTGACCCAAAAATGCGAGAAAAGAGCGAAAACATCAAAACTCGGGAAGCTAAAGAGGCACGATCAGTTTGAGATTTTAAAGGGTTTTTGTGAGAACGTCGTGAAGAAAATGATTGCAAAGCAAGAGCAGATGCACAATAGGCTACTGGAGGACATGATGAGAAGAGACCAGGAAATATTCGCAAGAGAGGAAGCTCGAAAGAAACAGGAGATGGATACGGTGAACAGGGAGCTCGAAATGATAGCGAAAGAGGGGGCTGTGGCAGGGCAAAGGCAGGCCGCCATTATTGATTTATTGAAGAAAATTTCAGACCACCAGAGCCATCCCATGAAAACGGTATCGGTGGATGATCCGAATCCAACTTCTGTGACTACTTCTTGCCCGTCAAACTCCAAAAACCCTAATCCGTTTTGTAATTACAGCGGCAAGAGCAATCCTGAGCCGCTGCCACGCGGGGTTCGAAACCGCGCAAGTGAAGGTGTAGAAGATCAGAACCCTGATAATTCGAGTGAAGTTCCTGATGCAATGATCAGGCAGTCAAATGGGTGGAGCAAGAGAAAAGCATGGGCACAAAATTGTGTGGTGAGAGAGAAGGAAGAGGTGGGAAGAAGATGGCCGATGGAGGAAGTGAGGATGCTAATAAAGCTGAGATGCAGTGCCAAGGAAGAGAGAGAAGGAGGGAGCAACAGGGTTCCGGTGTGGGAGAGAATATCGGAAGGAATAAGGGAGATGGGGTACGAGAGGAGCGCTAAGAGGTGCAAAGAGAAATAG 1368 0.4817 MFDGAPEQFHHLIAPRNSSLPFPPFDAHNPSPHHHLLSPLHHKDEEREQEEACTNLEIHGRQPQPAQHELLDSPWTDDEVLALLRIRSSLDAWFPELTWQHVSRKLVDLGFKRSAEKCKEKFEEETSYLNNIHYTKNNSCHFISELEQLYQPQQAHQIPRVEVEVRCHESKQPSEKLTDQELHSKTDHTVEDGPKNDATLTQKCEKRAKTSKLGKLKRHDQFEILKGFCENVVKKMIAKQEQMHNRLLEDMMRRDQEIFAREEARKKQEMDTVNRELEMIAKEGAVAGQRQAAIIDLLKKISDHQSHPMKTVSVDDPNPTSVTTSCPSNSKNPNPFCNYSGKSNPEPLPRGVRNRASEGVEDQNPDNSSEVPDAMIRQSNGWSKRKAWAQNCVVREKEEVGRRWPMEEVRMLIKLRCSAKEEREGGSNRVPVWERISEGIREMGYERSAKRCKEK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3935 455 ProSiteProfiles Myb-like domain profile. 67 126 IPR001005 -
Prci3g3935 455 MobiDBLite consensus disorder prediction 169 197 - -
Prci3g3935 455 MobiDBLite consensus disorder prediction 311 341 - -
Prci3g3935 455 Gene3D - 75 129 - -
Prci3g3935 455 Gene3D - 404 455 - -
Prci3g3935 455 FunFam Trihelix transcription factor GT-2 75 131 - -
Prci3g3935 455 Coils Coil 263 283 - -
Prci3g3935 455 MobiDBLite consensus disorder prediction 307 373 - -
Prci3g3935 455 PANTHER FI21293P1 31 455 - -
Prci3g3935 455 Pfam Myb/SANT-like DNA-binding domain 402 455 IPR044822 -
Prci3g3935 455 Pfam Myb/SANT-like DNA-binding domain 73 149 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3935 Prci-Chr3 47449631 47452708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3935 222 455 Trihelix Transcription Factor Family AT5G28300 37.652 1.76e-33 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci3g3935 Myb_DNA-bind_4 8.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3935 - - pcin:129307148 924.85