Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3923 ATGAATGGTGCCGCACACCTCGAACCAGATTACTCCGAATTTGTCGAAGTTGATCCCACCGGCAGATATGGCAGATACAATGAAATTCTCGGCAAGGGGGCTTCAAAGACAGTATATAGAGCATTCGATGAGTACCAAGGTATTGAAGTTGCCTGGAACCAAGTCAAGGTGTATGATTTCCTGCAAAGCCCCGAAGATCTTGAGAGGCTCTACTGTGAAATTCATCTACTGAAAACATTGAAGCACAAAAACATCATGAAATTTTATACGTCTTGGGTCGATACTGCTAATAGGAATATCAACTTCGTGACCGAGATGTTCACTTCTGGTACTCTCAGACAGTATAGGCTAAAGCACAGAAGAGTGAACATCAGAGCAGTAAAGCATTGGTGCAGACAGATCCTGAGAGGGCTTCTCTATCTCCATAGCCATGACCCACCTGTGATTCATAGAGATCTCAAATGTGATAATATTTTTGTTAATGGACACCAAGGCGAAGTGAAGATTGGTGATCTTGGTCTGGCAGCAATTCTACGGAAATCCCATGCTGCAAATTGTGTCGGAACGCCTGAGTTCATGGCCCCAGAAGTCTACGAAGAAGCATATAATGAATTAGTTGATATATACTCCTTTGGCATGTGCATACTTGAAATGATCACATTTGAATATCCTTATAGTGAATGTACTCATCCAGCACAAATCTACAAGAAAGTCATTTCTGGGAAAAAACCAGACGCTTTATATAAAGTCAAGGATCCGGAAGTGAGACAATTTGTTGAGAAATGCTTAGCAACTGTGTCGCTGAGGCTCTCAGCAAGAGAGCTTCTAGACGACCCTTTCCTCCAAATTGATGATTACGAATCATTATTAAGGCTAGCAGACAGTGGGGAATTTGATGACATGAGTCCTCTCATTCGACACCCACTCTATGATTTTCATCGAAGTTATAGTAACATGAGTAAGGAATACTCTAACGGATATGGCTATGATGTAGACTGGTTTCCTCATCCAACTGAGATTGAACCTGCTGGAATTGAACTCTTTCAATACAAGGATGATGAACCATCCGAAGATGTTGACATAAGCATCAAAGGCAAGAGAAAAGACGACGGGGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGGCATATTCGAAATATTTATTTCCCATTTGACATAGAGACCGATACAGCCTTAAGTGTGGCAACTGAAATGGTTGCAGAACTTGACATGACTGATCACGATGTAACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGGCCAGGGCCAGGGATTGAGGAAACTCCCCGTTTTGCAAGTCAAAGTTTCTGCCACAACTGTGCATCTAATCATACTTCCAGTGGTTCCCTTACGGATTTTCTGTCACATAATTCAGGCACCAAGAACACGCAATTTCTTCAGTGCTGTAGGCATAAATGTGCTTTAATGCACGGACGGTTTGAGGAGATCGCATTTGAGTCTGATGAGTACGGCAATCATATTAGAGAGAATGCTGATGCGCCTAACGTATCAAGTCATTCAGGCTGCTTGCAGTATCGGGAGTTATGGAATCACCATGAAAGTCGTGAACTTAGTCCAGTGGAATCTGAAAGAAGCCACTCTGATGAACAAAATGAACCGTTAGATAAATCAGTATCAGCTGAAGGTGAGGGATATGATGCTTGGGATTACAAGTTCGCACCCAATGCAGGAAATTCCCAGAAGAACCTATCAGGAACGCATTATTTTACCCCAATTGGTTCGTTTTATTGTGACCTTGAGAAAGAATGTGAAAAAGACAGCCAGCAGGAGCTAAGATGGCTCCGAGCAAAGTACCAAATGGAGTTAAGGGAACTCAGGGATCGTCAGCTTGGGCTAACGGAAAAATCTCCGCATGACAGAAAGCAGAAATCAGAATGCGGAATATCATCACCTTTACAGACGGACACTCTTGAAAGAGGAAACAGTTTTAAACCCTTAGCTAATTGTGGTTCCAGCTGCCACTCTCACTTCAACAAGAGCTGCCCCAATTCGGACACCCAAAGGGCCCGAAATTGTGAGGCGATGGATTCCCCTGGAGGTGTCGTTACCGCAAAGAGTTTTTACACAGGCTCATTGGCTCCCCACTCTCTGCACAGGACTGTTTCCCTCCCAGTTGATGCGGTTGATATATAA 2205 0.4322 MNGAAHLEPDYSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKVYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGHQGEVKIGDLGLAAILRKSHAANCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYESLLRLADSGEFDDMSPLIRHPLYDFHRSYSNMSKEYSNGYGYDVDWFPHPTEIEPAGIELFQYKDDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIETDTALSVATEMVAELDMTDHDVTRIADMIDGEIASLVPEWRPGPGIEETPRFASQSFCHNCASNHTSSGSLTDFLSHNSGTKNTQFLQCCRHKCALMHGRFEEIAFESDEYGNHIRENADAPNVSSHSGCLQYRELWNHHESRELSPVESERSHSDEQNEPLDKSVSAEGEGYDAWDYKFAPNAGNSQKNLSGTHYFTPIGSFYCDLEKECEKDSQQELRWLRAKYQMELRELRDRQLGLTEKSPHDRKQKSECGISSPLQTDTLERGNSFKPLANCGSSCHSHFNKSCPNSDTQRARNCEAMDSPGGVVTAKSFYTGSLAPHSLHRTVSLPVDAVDI 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3923 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Prci3g3923 734 Gene3D - 371 437 - -
Prci3g3923 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 649 - -
Prci3g3923 734 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Prci3g3923 734 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3923 734 MobiDBLite consensus disorder prediction 538 560 - -
Prci3g3923 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 427 IPR024678 GO:0004674|GO:0005524
Prci3g3923 734 MobiDBLite consensus disorder prediction 633 649 - -
Prci3g3923 734 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Prci3g3923 734 CDD STKc_WNK 22 281 - -
Prci3g3923 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Prci3g3923 734 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Prci3g3923 734 MobiDBLite consensus disorder prediction 538 564 - -
Prci3g3923 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Prci3g3923 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3923 734 Coils Coil 612 639 - -
Prci3g3923 734 MobiDBLite consensus disorder prediction 633 663 - -
Prci3g3923 734 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Prci3g3923 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3923 Prci-Chr3 47316429 47320044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3923 1 500 MAP Kinase Kinase Kinase AT3G22420 57.090 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci3g3923 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3923 K08867 - gmx:100775959 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3923 3 47316429 47320044 Prci3g3923 3 47316429 47320044 CCT
Prci3g3923 3 47316429 47320044 Prci3g3923 3 47316429 47320044 ECH