Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3918 ATGCTTTCGCCGTTGGTTTCTTGGATCTTGGCGTCCTCTCCTTCTTCTTCATCCTTTTCGGAGGAGGAAGAAGATAACTTTGTGGACGACGGAGATCATTACGAGAACGTCGGCGAGAACGAGCATTTCCTCCGCGAAGCCGAGGAGCTTCCTTCAACATCATGCGCTGGTAATAATAAAACCATTCCCGTTTCCCTCGCCACCGCCGGCGCCGACGACTCTTACATTCCCAACACGGACACCAGCTCTAGAAAACGACGGCGTATCACCCATTCTTATCCTCGGAGACAGTATCAGAGGCTGTGGACGAAGCAAGACGAGATCGAGCTCTTGAAAAGATACCTGGATTACATCAAGCAGCACAGATGGGCCACCACATCTCTCCAAAACGACGTGACATTCTTATACGATCACATCAGGCCTAAATTCAACAAGGATTTCAACAAGAACCAACTTGTCCAGAAGCTTCGAGCATTAAAGAGAAAACACAAGACTGTTTCCAACAAAATCAACTCCGACAGGGAAGTTTCGCACAAGAGCCCCCAGGAGGAGGCAATTTTTGAGATCTCCGAAAGGATCTGGGGCAATAATCGAGACAAGGAATCAAGCCCGGATCCCGACGCCGACAACAATATCGAGGTGAATAGTGAAGAAGAAGATGGCGGTGAATCGGGGCAATTGAATGAGGAGAACAAAGATATAAAGAGGCTGGTAGAGGAAACGATGAGGTCGTGTTTGTCACCACTGAACATTAATAATGCAACGGAAGGATCAGCATTGAAGTTAGTAGAGCAATACGGAAGTGGGGAAGAAGGCGATGATGAGAGGGGGAGAAAGCAGAGGATTCTGGAGCTGGAAGCTTATTTGGAGCAGTTGGAGTTGTTGCAGAATCAAATTAAGGCTAGGATAGAGGAGTTGCGAAGCGACGATGGATGA 936 0.4797 MLSPLVSWILASSPSSSSFSEEEEDNFVDDGDHYENVGENEHFLREAEELPSTSCAGNNKTIPVSLATAGADDSYIPNTDTSSRKRRRITHSYPRRQYQRLWTKQDEIELLKRYLDYIKQHRWATTSLQNDVTFLYDHIRPKFNKDFNKNQLVQKLRALKRKHKTVSNKINSDREVSHKSPQEEAIFEISERIWGNNRDKESSPDPDADNNIEVNSEEEDGGESGQLNEENKDIKRLVEETMRSCLSPLNINNATEGSALKLVEQYGSGEEGDDERGRKQRILELEAYLEQLELLQNQIKARIEELRSDDG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3918 311 Coils Coil 278 309 - -
Prci3g3918 311 Coils Coil 149 169 - -
Prci3g3918 311 Pfam Protein of unknown function, DUF573 99 195 IPR007592 GO:0006355
Prci3g3918 311 MobiDBLite consensus disorder prediction 166 182 - -
Prci3g3918 311 MobiDBLite consensus disorder prediction 188 230 - -
Prci3g3918 311 MobiDBLite consensus disorder prediction 163 182 - -
Prci3g3918 311 MobiDBLite consensus disorder prediction 193 207 - -
Prci3g3918 311 PANTHER BNAANNG10740D PROTEIN-RELATED 15 304 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3918 Prci-Chr3 47288129 47289433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3918 51 308 GeBP Transcription Factor Family AT5G28040 29.345 3.57e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Prci3g3918 DUF573 1.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3918 - - pcin:129306633 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3918 3 47288129 47289433 Prci3g3918 3 47288129 47289433 CCT