Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3915 ATGGTTGTACCGACTTCCTCTCATCTCAATTTTACTGTGAGAAGGCGCCAACCAGAGCTTGTAGCTCCAGCAAAGCCTACTCCTCATGAGTTTAAGCCACTGTCTGACTTGGATGACCAAGAATGCTTACGTGCCCACATCCCACTGGTGCATTTCTACCGTCACAAGGCTTCAATGGCGGGGAAGGACCCTGTCAAGGTCATCAAAGATGCTTTAGCTCAAACACTGGTATTTTACTATCCATTTGCAGGTAGACTCAGGGAAGTTGTCGGCCGCAAACTTTTGGTGGAGTGTAATGGAGAAGGCATTCTTTTTATTGAAGCCGACGCAGATGTAACGCTAGCTCAGTTTGGTGACAATCTTAAACCTCCATTTCCACGCTTCAATGAACTCCTTTACAACGTTCCTGGTTCTGAAGGAATCCTTCATTGCCCACTCTTGCTTATTCAGGTAACACGTCTCAAGTGTGGAGGCTTCGTGTTTGCTATTCGTATGAATCATACAATGACCGACGGACCTGGCATTTTCCAGTTCATGAATGCTTTAGCCGAAGTAGCTAATGGGGCAAGTGAACCCTCCATCATTCCTGTTTGGCATAGGAAGCTTCTAAGCGCCAGGGACCCACCGCGTGTTTCTTGTACCCATCGTGAGTTTGATGAAGTGGTTGGTGCAACCATCCCCTTAACAGGCATAACATACGAGTCTTTCTTCTTTGGGCCAACTGAGATATCTGCCCTTCGTCATCTAATTCCTCATCACCTCCAGAAATCTACAACATTTGAGGTTCTCACAGCATGTCTCTGGCGTTGTCGCACTAAGGCTTTACAACTTGATCCGAATGATGATGTCCGTGCATTGCTCATCGTCAATACACGTTTTGGACAAGGTAGGTTTAACCCTCCAATACCTTGTGGTTATTATGGCAATGCTTTTGTGTATCCAGCCGCAGTAGCCACTTCAAGGGAACTTTGTGAAAGCCCATTAGGACATGCCTTGGAGTTGGTGAAAAAAGCCAAGGCAAAAGTGAGTGCAGAGTATGTGCATTCCATGACTGATTTTTTGGTTACTAGAGGACGGCCTTGTTTTACATCAACGAGATCATGGATGATATCAGATCTATCGTGTCTTGGCTTTAGAGATGTTAATTTTGGGTGGGGCAAGGCTGTGTATGCTGGTCTAGCTAAGGCTGGACTTGGACCGCTTACTGGAGTGAGTTTCTCCATCGCATCTGCCAACAACAAAGGAGAGGAGGGTAGATTAGTGCTTATGTGCTTGCCATCCAAGGCCATGAAGATATTTGGCAAGGAGTTGGGTAACATGCTTGGTAATTACGAGAACAATCAAAATTATAGCGCTATCCTGTCTCACTTGTAG 1374 0.4585 MVVPTSSHLNFTVRRRQPELVAPAKPTPHEFKPLSDLDDQECLRAHIPLVHFYRHKASMAGKDPVKVIKDALAQTLVFYYPFAGRLREVVGRKLLVECNGEGILFIEADADVTLAQFGDNLKPPFPRFNELLYNVPGSEGILHCPLLLIQVTRLKCGGFVFAIRMNHTMTDGPGIFQFMNALAEVANGASEPSIIPVWHRKLLSARDPPRVSCTHREFDEVVGATIPLTGITYESFFFGPTEISALRHLIPHHLQKSTTFEVLTACLWRCRTKALQLDPNDDVRALLIVNTRFGQGRFNPPIPCGYYGNAFVYPAAVATSRELCESPLGHALELVKKAKAKVSAEYVHSMTDFLVTRGRPCFTSTRSWMISDLSCLGFRDVNFGWGKAVYAGLAKAGLGPLTGVSFSIASANNKGEEGRLVLMCLPSKAMKIFGKELGNMLGNYENNQNYSAILSHL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3915 457 Pfam Transferase family 13 436 - -
Prci3g3915 457 PANTHER ACYL TRANSFERASE 4 11 441 - -
Prci3g3915 457 Gene3D - 228 437 IPR023213 -
Prci3g3915 457 Gene3D - 8 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3915 Prci-Chr3 47270579 47272270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3915 16 437 Monolignol Biosynthesis Gene Families AT5G48930 31.207 1.77e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3915 K19861 - qsu:112029458 573.933