Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3908 ATGCAACGGAAGAAAGTGAGAACCGAAATGAAGAACATTTTCAAGAAGCTTCACATAGGGAGCAACCACGATCCTACTCCATCCAATGAAACCCCTCCCTCCTCCTCCTCCGCAGTAAACTCACAATCGGGCGCCTCTGATCTCCGTACAGCTCCTGTTCAGTATTCTGGTACTCCTGTGCCTACTCCTCCTCCTCCTCCTTCTTCTTCACCATCGCCTTCCCCTGCTGCTCCCCCAGCTGGCGGCACTTCCTCTGCGCCACTTCTTACGTCCAATCTTCAAGACTATTTCTCTTCGGAGGAGGAGTTCCAGGTTCAGTTAGCCCTAGCCATCAGCGCTTCCAATTCGGAGTTCCCGGATGATCCTGAGAAGGATCAGATCCGAGCGGCAACGATACTGAGCTTAGGAGGTCATCGAACTCATTGCGCAACGAATAAGGATCACGAAGCGGAGGCACTCTCTAGACAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTAGCAGATGGTTTTTATGATGTATACAGCCTCTGTCATGATGCTGCAATGCAGAAGAAAATGCCATCTCTGGCAGATCTTGAAGGAAACCCTGGAAATTCTGAATTTGAAATTGTCATGGTTAATAGAAAGATTGATCCTGTGTTGGAAGAGCTGTTGCAAATTGCCCATTGCATTGCATTAGACTGCCCAGTCACCAAAGTTGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGGCACATGGGTGGTCCTGTAAAGGATGCTAATATTGTATTGGCAAAATGGATGGAAAGAAGTACAGAGCTAAGAACATCTCTTCACACAAGCGTGTTGCCTCTTGGGTCCATAAATATTGGGCTATCCAGGCATAGGGCTTTACTTTTCAAGGCATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGCTGGATGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGAACACTTATCCCAGCTGACTTAAGTGCGAAGGATACTGCCTTTAAGCCATACAATCCCAAGATTTTGCCAAGATTACAATCCAACAAAGAAAGTGGATTTCCTTACTCAAGGCAGACGTCATCTTATGGTGAAGAAAGTAGTCAAATTTCTGTGGAAAGAGGTGGTTCATCACCATTGAATGGAAAATTATGTTTTGAGAACTCAGACATATCTTCAAAAATGAGCTCAAGCAGAGACACCGGTGCCAGTGCTTCCAAAATGTCTGATAGAGCAACTTCCAGCCAACCATCAACAGGCACTTCACTGTACAAGGGGACTCTTGGAATGAATACACTTGGTGATGGGACAAGACTGAATGTCAATATTGTACCCTATGGTCCAGATAGCCCAGACAACTCAAGGAGCCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCTCTGTACACAACAAGCCTATGGAAAATAAGTCTTCTGAGCTTCAAAATACGAGAGATAATTCTGTCTCTGGCCAACCCTCAGGGCCATTGATGTGGAAGAATCGTTATGCTTACAATGACATGCCCAGAAAAGTTAACTGTGATCCTAGTGAATATAGTAATCAATCATTATACAATTCTAATTATAATATAAATAAAGACAGAAGTACTCTCGATCTGATGGGAGTCACTGGTTCAGCATTGGGACCTGGTGCAGGTGGGCTGAACAGGATCAAGGATCTCAAAGAGGACTGTAACAAATGGAATGGGGGAGGTTTTGAAAATGACATGGTAGGTGTGGCTAAAGAACATGAAAACAATGAAATTAATTTTCATGACCGGAGAAAGTGCACTCATGACAGATTCATGGGGAGCAATTTGAAATTAAAGGCCTCAGAGCGTCCTACCTCATCAATTGATTCCATTGCTATTGGGGGTGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAAATTCCATGGGAGGATTTTATTATTGGTGAAAGAATAGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTGAAGAAGTTTCTGGATCAGGACTTTTCAGGCGCTGCATTGGCTGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTGCGTCATCCAAATATTGTTCTTTTCATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTTTCTCCCAAGAGGAAGCTTGTACAAAATTCTCCATCGTCCTAATTGTCAGATCGATGAGAAACGTAGAATAAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTACACACCAGCATGCCTACAATTGTTCACCGAGATCTGAAGTCACCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGATTTTGCTGGGGAATGGGGAGAAGTGA 2463 0.4369 MQRKKVRTEMKNIFKKLHIGSNHDPTPSNETPPSSSSAVNSQSGASDLRTAPVQYSGTPVPTPPPPPSSSPSPSPAAPPAGGTSSAPLLTSNLQDYFSSEEEFQVQLALAISASNSEFPDDPEKDQIRAATILSLGGHRTHCATNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCHDAAMQKKMPSLADLEGNPGNSEFEIVMVNRKIDPVLEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIVLAKWMERSTELRTSLHTSVLPLGSINIGLSRHRALLFKALADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKDTAFKPYNPKILPRLQSNKESGFPYSRQTSSYGEESSQISVERGGSSPLNGKLCFENSDISSKMSSSRDTGASASKMSDRATSSQPSTGTSLYKGTLGMNTLGDGTRLNVNIVPYGPDSPDNSRSLFADLNPFQIKGTGKTSVHNKPMENKSSELQNTRDNSVSGQPSGPLMWKNRYAYNDMPRKVNCDPSEYSNQSLYNSNYNINKDRSTLDLMGVTGSALGPGAGGLNRIKDLKEDCNKWNGGGFENDMVGVAKEHENNEINFHDRRKCTHDRFMGSNLKLKASERPTSSIDSIAIGGDQILDDVDVGECEIPWEDFIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRGSLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSMPTIVHRDLKSPNLLVDNNWNVKILLGNGEK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3908 820 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 86 813 - -
Prci3g3908 820 MobiDBLite consensus disorder prediction 57 80 - -
Prci3g3908 820 ProSitePatterns Protein kinases ATP-binding region signature. 680 702 IPR017441 GO:0005524
Prci3g3908 820 MobiDBLite consensus disorder prediction 1 18 - -
Prci3g3908 820 SUPERFAMILY Protein kinase-like (PK-like) 664 813 IPR011009 -
Prci3g3908 820 ProSiteProfiles Protein kinase domain profile. 674 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3908 820 MobiDBLite consensus disorder prediction 1 89 - -
Prci3g3908 820 MobiDBLite consensus disorder prediction 22 56 - -
Prci3g3908 820 Pfam Protein tyrosine and serine/threonine kinase 676 813 IPR001245 GO:0004672|GO:0006468
Prci3g3908 820 MobiDBLite consensus disorder prediction 374 451 - -
Prci3g3908 820 FunFam Serine/threonine-protein kinase isoform 1 665 752 - -
Prci3g3908 820 Gene3D Transferase(Phosphotransferase) domain 1 752 814 - -
Prci3g3908 820 MobiDBLite consensus disorder prediction 492 524 - -
Prci3g3908 820 MobiDBLite consensus disorder prediction 364 451 - -
Prci3g3908 820 Gene3D Phosphorylase Kinase; domain 1 667 751 - -
Prci3g3908 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Prci3g3908 820 SMART serkin_6 674 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3908 820 Pfam Ethylene-responsive protein kinase Le-CTR1 150 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3908 Prci-Chr3 47222356 47229273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3908 10 813 MAP Kinase Kinase Kinase AT1G08720 50.060 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci3g3908 EDR1 6.3e-76 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3908 - - pcin:129307411 1553.88