Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3907 ATGCAACGGAAGAAAGTGAGAACCGAAATGAAGAACATTTTCAAGAAGCTTCACATAGGGAGCAACCACGATCCTACTCCATCCAATGAAACCCCTCCCTCCTCCTCCTCCGCAGTAAACTCACAATCGGGCGCCTCTGATCTCCGTACAGCTCCTGTTCAGTATTCTGGTACTCCTGTGCCTACTCCTCCTCCTCCTCCTTCTTCTTCACCATCGCCTTCCCCTGCTGCTCCCCCAGCTGGCGGCACTTCCTCTGCGCCACTTCTTACGTCCAATCTTCAAGACTATTTCTCTTCGGAGGAGGAGTTCCAGGTTCAGTTAGCCCTAGCCATCAGCGCTTCCAATTCGGAGTTCCCGGATGATCCTGAGAAGGATCAGATCCGAGCGGCAACGATACTGAGCTTAGGAGGTCATCGAACTCATTGCGCAACGAATAAGGATCACGAAGCGGAGGCACTCTCTAGACAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTAGCAGATGGTTTTTATGATGTATACAGCCTCTGTCATGATGCTGCAATGCAGAAGAAAATGCCATCTCTGGCAGATCTTGAAGGAAACCCTGGAAATTCTGAATTTGAAATTGTCATGGTTAATAGAAAGATTGATCCTGTGTTGGAAGAGCTGTTGCAAATTGCCCATTGCATTGCATTAGACTGCCCAGTCACCAAAGTTGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGGCACATGGGTGGTCCTGTAAAGGATGCTAATATTGTATTGGCAAAATGGATGGAAAGAAGTACAGAGCTAAGAACATCTCTTCACACAAGCGTGTTGCCTCTTGGGTCCATAAATATTGGGCTATCCAGGCATAGGGCTTTACTTTTCAAGGCATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTGAACATAATAAAGCTGGATGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGAACACTTATCCCAGCTGACTTAAGTGCGAAGGATACTGCCTTTAAGCCATACAATCCCAAGATTTTGCCAAGATTACAATCCAACAAAGAAAGTGGATTTCCTTACTCAAGGCAGACGTCATCTTATGGTGAAGAAAGTAGTCAAATTTCTGTGGAAAGAGGTGGTTCATCACCATTGAATGGAAAATTATGTTTTGAGAACTCAGACATATCTTCAAAAATGAGCTCAAGCAGAGACACCGGTGCCAGTGCTTCCAAAATGTCTGATAGAGCAACTTCCAGCCAACCATCAACAGGCACTTCACTGTACAAGGGGACTCTTGGAATGAATACACTTGGTGATGGGACAAGACTGAATGTCAATATTGTACCCTATGGTCCAGATAGCCCAGACAACTCAAGGAGCCTTTTTGCAGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCTCTGTACACAACAAGCCTATGGAAAATAAGTCTTCTGAGCTTCAAAATACGAGAGATAATTCTGTCTCTGGCCAACCCTCAGGGCCATTGATGTGGAAGAATCGTTATGCTTACAATGACATGCCCAGAAAAGTTAACTGTGATCCTAGTGAATATAGTAATCAATCATTATACAATTCTAATTATAATATAAATAAAGACAGAAGTACTCTCGATCTGATGGGAGTCACTGGTTCAGCATTGGGACCTGGTGCAGGTGGGCTGAACAGGATCAAGGATCTCAAAGAGGACTGTAACAAATGGAATGGGGGAGGTTTTGAAAATGACATGGTAGGTGTGGCTAAAGAACATGAAAACAATGAAATTAATTTTCATGACCGGAGAAAGTGCACTCATGACAGATTCATGGGGAGCAATTTGAAATTAAAGGCCTCAGAGCGTCCTACCTCATCAATTGATTCCATTGCTATTGGGGGTGATCAAATATTGGATGATGTAGATGTTGGTGAATGTGAAATTCCATGGGAGGATTTTATTATTGGTGAAAGAATAGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTGAAGAAGTTTCTGGATCAGGACTTTTCAGGCGCTGCATTGGCTGAATTCAAGAGAGAAGTACGGATCATGCGTCGATTGCGTCATCCAAATATTGTTCTTTTCATGGGTGCTGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAGTTTCTCCCAAGAGGAAGCTTGTACAAAATTCTCCATCGTCCTAATTGTCAGATCGATGAGAAACGTAGAATAAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTACACACCAGCATGCCTACAATTGTTCACCGAGATCTGAAGTCACCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGGTTTGCGATTTTGGGTTATCACGCTTGAAGCACAACACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCCTCAAATGAGAAGTGTGACGTTTACAGTTTTGGAGTCATCCTGTGGGAGCTTGCCACTCTAAGGTTGCCATGGAGCGGGATGAACCCTATGCAGGTTGTTGGTGCAGTTGGTTTCCAATATCGTCGCCTAGAAATCCCCAAGGAAGTTGATCCCGTTGTTGCAAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCATTTGCACAGCTTACTGTAGTTTTAAAGTCCCTGCAGCGTTTAGTTATCCCATCTCATCAAGACCAGATGGCTTCGCCTCTGCCACAGGAGATTTCTGTAAATTCCACCCCTTAG 2868 0.4418 MQRKKVRTEMKNIFKKLHIGSNHDPTPSNETPPSSSSAVNSQSGASDLRTAPVQYSGTPVPTPPPPPSSSPSPSPAAPPAGGTSSAPLLTSNLQDYFSSEEEFQVQLALAISASNSEFPDDPEKDQIRAATILSLGGHRTHCATNKDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCHDAAMQKKMPSLADLEGNPGNSEFEIVMVNRKIDPVLEELLQIAHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIVLAKWMERSTELRTSLHTSVLPLGSINIGLSRHRALLFKALADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKDTAFKPYNPKILPRLQSNKESGFPYSRQTSSYGEESSQISVERGGSSPLNGKLCFENSDISSKMSSSRDTGASASKMSDRATSSQPSTGTSLYKGTLGMNTLGDGTRLNVNIVPYGPDSPDNSRSLFADLNPFQIKGTGKTSVHNKPMENKSSELQNTRDNSVSGQPSGPLMWKNRYAYNDMPRKVNCDPSEYSNQSLYNSNYNINKDRSTLDLMGVTGSALGPGAGGLNRIKDLKEDCNKWNGGGFENDMVGVAKEHENNEINFHDRRKCTHDRFMGSNLKLKASERPTSSIDSIAIGGDQILDDVDVGECEIPWEDFIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRGSLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSMPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQYRRLEIPKEVDPVVARIIWECWQQDPNLRPSFAQLTVVLKSLQRLVIPSHQDQMASPLPQEISVNSTP 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3907 955 ProSiteProfiles Protein kinase domain profile. 674 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3907 955 MobiDBLite consensus disorder prediction 57 80 - -
Prci3g3907 955 ProSitePatterns Protein kinases ATP-binding region signature. 680 702 IPR017441 GO:0005524
Prci3g3907 955 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 86 930 - -
Prci3g3907 955 MobiDBLite consensus disorder prediction 1 18 - -
Prci3g3907 955 Pfam Ethylene-responsive protein kinase Le-CTR1 150 348 - -
Prci3g3907 955 PRINTS Tyrosine kinase catalytic domain signature 897 919 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 PRINTS Tyrosine kinase catalytic domain signature 834 844 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 PRINTS Tyrosine kinase catalytic domain signature 853 875 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 PRINTS Tyrosine kinase catalytic domain signature 748 761 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 PRINTS Tyrosine kinase catalytic domain signature 787 805 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 MobiDBLite consensus disorder prediction 1 89 - -
Prci3g3907 955 MobiDBLite consensus disorder prediction 22 56 - -
Prci3g3907 955 MobiDBLite consensus disorder prediction 374 451 - -
Prci3g3907 955 Pfam Protein tyrosine and serine/threonine kinase 676 924 IPR001245 GO:0004672|GO:0006468
Prci3g3907 955 SMART serkin_6 674 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3907 955 FunFam Serine/threonine-protein kinase isoform 1 665 752 - -
Prci3g3907 955 MobiDBLite consensus disorder prediction 492 524 - -
Prci3g3907 955 MobiDBLite consensus disorder prediction 364 451 - -
Prci3g3907 955 CDD STKc_MAP3K-like 680 926 - -
Prci3g3907 955 SUPERFAMILY Protein kinase-like (PK-like) 664 946 IPR011009 -
Prci3g3907 955 Gene3D Phosphorylase Kinase; domain 1 667 751 - -
Prci3g3907 955 FunFam PAS domain-containing protein tyrosine kinase family protein 752 943 - -
Prci3g3907 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Prci3g3907 955 Gene3D Transferase(Phosphotransferase) domain 1 753 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3907 Prci-Chr3 47221173 47229254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3907 10 910 MAP Kinase Kinase Kinase AT1G08720 54.711 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci3g3907 PK_Tyr_Ser-Thr 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3907 - - pcin:129307411 1845.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3907 3 47221173 47229254 Prci1g2611 1 45647110 45649011 CCT
Prci3g3907 3 47221173 47229254 Prci3g3907 3 47221173 47229254 ECH