Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3906 ATGGCGATGGACTTGACAAGAATCACTATACGGCCATTCAAGCTAAGCGACGTTGATGATTTCATGTTATGGGCAGGAGATGAGCAAGTGACTCAGAATACTCGAATGGACTCAATCAGAAGCAGGGAAGAGGCTTTGACTTTTATTAGAGATGTTTGCATACCTCACCCTTGGCGTCGCTCCATATGCATCGACGAGCGCTGCATCGGTATGGTTTCTGTGAGTCCTTGCTCAGGGGACGAGAGATGCAGAGCAGAACTTGGATATGTTGTTGCCGCATCCTTCTGGGGCCAAGGCATCGGAACTAAAGTAGTAAACATGGCCGTGTCCCAAGCCTTCGCCCAGTTCCCGGATTTGCTGAGATTAGAGGCTCTGGTTGATTCTCGCAACAAGGCTTCCCAGAGGGTTTTGGAGAAGGCCGGCTTCCTTAGGGAGGGTCTCCTCAGAAATTACGCAATTGTCAAGGGCCTCGTCAGGGATGTTTGTATCTACAGTTTTCTGTCATCAAGTGCTCCTCGTCCTCCCCACCCCCCACTGTGCTAG 543 0.5064 MAMDLTRITIRPFKLSDVDDFMLWAGDEQVTQNTRMDSIRSREEALTFIRDVCIPHPWRRSICIDERCIGMVSVSPCSGDERCRAELGYVVAASFWGQGIGTKVVNMAVSQAFAQFPDLLRLEALVDSRNKASQRVLEKAGFLREGLLRNYAIVKGLVRDVCIYSFLSSSAPRPPHPPLC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3906 180 Pfam Acetyltransferase (GNAT) domain 7 142 IPR000182 GO:0016747
Prci3g3906 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 160 IPR000182 GO:0016747
Prci3g3906 180 CDD NAT_SF 62 123 - -
Prci3g3906 180 Gene3D - 3 167 - -
Prci3g3906 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 169 - -
Prci3g3906 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 167 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3906 Prci-Chr3 47220361 47221263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci3g3906 Acetyltransf_3 2.9e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3906 - - gmx:100527210 239.58