Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3904 ATGGACGGACACAATGTGTGCGTTTTAGCTTATGGACAAACAGGCACCGGCAAGTCATTCACTATGAATGGCACAAACGAGCAGCCAGGAATTATTCCCCGAGCTCTTGAGGAGTTATTTCGGCAAGCCTCTCTAAAGGATTCATCATCTTTTACATTTTCAATGAGCATGTTAGAAGTCTACATGGGTAGTCTAAGAGATCTGCTGGCTCCGAGACCATGCGGTAGAGCATATGAACCTGTGACTAGATGCAATCTCAACATTCAAACAGATCCAAAGGGATTGGTCGAAATTGAAGGTCTCTCGGAAGTGCAAATCTCAGATTCTGCTAAAGCCAGATGGTGGTACAACAAGGGTAGAAGAGCAAGATCCACTTCATGGACTAATGTGAATGAAGCATCGAGCAGGTCACACTGCTTGACAAGGATCACCATATCCCGTCGTGGATACGCTTTGGAAGGCAAAAGGGAAAGAAGCAAGTTGTGGATGGTTGATCTCGGAGGAAGCGAGCGGTTACTCAAAACTGGAGCCATAGGATTAACACTTGATGAGGGCCGAGCCATTAATCTTTCTCTTTCTGCTTTAGCTGATGTCATTGCAGCTTTGAGGAGTAAGAGGAGTCATGTGCCTTACAGAAATAGCAAGCTAACTCAAATACTCAAAGATTCTTTAGGTAATGGTTCGAAGGTCTTGATGCTTGTGCACATAAGCCCTTCCGAGGAAGATGCTTGTGAGACGATGTGTTCTTTAAACTTTGCAAAGAGGGCAAGAGCAACAGAGTACAACAAAGAAATACCAGAGGAATTGAGAAAGCAAAAGGAGAAGAAGATCCTGAAGCTTGAGGAAGAGATGAGGGAAGCTGAAAAGGAACACCAGAAACTTAGGGATCGAATTCAGGAGGCTGAGTTCAAGTTAGGCGAACAAAAAAAGGTCTTCTCAGCTACATATAAGCCTCTGGAAAACAATGACAGTGCCCCTATAAGCCCTAAAAATAATGTGAAAGAGGTCACTGAAAACCCGAAAGCATCTAAGAAATATATTAAAAGAAAAATATCGAATTCTATGCCTCGATTCATGACTTCCACCGTTGCCAGTCGCCAAAGGCAAAGTGCTTCGGAAAAAGAGCTTGTTGGAAGATCAAGAAGTTTAAGTTCAGCGATCACTAGGGGTTCCCTCAAGTTTTCAGGTTCTCAATCACTGAACTGCTCGGATCTCCGCTTGAAAGCAGTAATACAGAATTCAACTGGAAAATCTCGGCTTGGTGAAACCACGGGCGAGAGTCCTAAATGCAGCGGTTTGGAATCAAAAACCACCAATCCTGGAAGCAGGATGTTCACTTCATCGGATCCTAACGTGGTAGTTATGTTACGTCGTCATAGAAGAAGAATGTCCGATCTGATCTGA 1404 0.438 MDGHNVCVLAYGQTGTGKSFTMNGTNEQPGIIPRALEELFRQASLKDSSSFTFSMSMLEVYMGSLRDLLAPRPCGRAYEPVTRCNLNIQTDPKGLVEIEGLSEVQISDSAKARWWYNKGRRARSTSWTNVNEASSRSHCLTRITISRRGYALEGKRERSKLWMVDLGGSERLLKTGAIGLTLDEGRAINLSLSALADVIAALRSKRSHVPYRNSKLTQILKDSLGNGSKVLMLVHISPSEEDACETMCSLNFAKRARATEYNKEIPEELRKQKEKKILKLEEEMREAEKEHQKLRDRIQEAEFKLGEQKKVFSATYKPLENNDSAPISPKNNVKEVTENPKASKKYIKRKISNSMPRFMTSTVASRQRQSASEKELVGRSRSLSSAITRGSLKFSGSQSLNCSDLRLKAVIQNSTGKSRLGETTGESPKCSGLESKTTNPGSRMFTSSDPNVVVMLRRHRRRMSDLI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3904 467 PRINTS Kinesin heavy chain signature 160 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 PRINTS Kinesin heavy chain signature 3 24 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 PRINTS Kinesin heavy chain signature 128 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 PRINTS Kinesin heavy chain signature 209 230 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 397 IPR027640 GO:0003777|GO:0007018
Prci3g3904 467 SMART kinesin_4 1 267 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 MobiDBLite consensus disorder prediction 360 382 - -
Prci3g3904 467 MobiDBLite consensus disorder prediction 417 447 - -
Prci3g3904 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 298 IPR027417 -
Prci3g3904 467 Coils Coil 270 304 - -
Prci3g3904 467 Pfam Kinesin motor domain 1 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3904 467 Gene3D Kinesin motor domain 1 304 IPR036961 -
Prci3g3904 467 ProSiteProfiles Kinesin motor domain profile. 1 259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3904 Prci-Chr3 47215633 47218724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3904 1 257 Calmodulin-binding Proteins AT5G65930 44.402 5.15e-60 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3904 - - qsa:O6P43_011170 630.557