Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3902 ATGTTTATTTCCAGTGAAGAGCAGATTCTGTTCCATTCAGAGCATGCATCAGAAGCTGTCATCGAGGCTTTTAAATCAACTTCTTCGAATTTAAATCCTGATTCGGTTAATGGGTCCCCAGCAGTTGCTGAATTCCCCCATTCGCCTCCAGTTTCCACCATTTACACTGATGTTGGCGTTATTCCCGAACACGAAAAGAACGAGCTAGAGCAACTGATATCAAATTTAGAAAGAGGAGTTAAGCAGCTGAGGAATGAGCAGTGCATATTTGATAAAAAGCGGAGAGAAGCACTGAGTAAGATATTAGACATTAAAGGCAGCATTCGAGTATTCTGCAGAGTTCGACCCTTTCTATTGGCGGAGAAGAGAAGAACTTCTGAGCCCGTTTCAGCTGCATCAGAAAGGATTCGGGTTAAACTGGGAGGAACGAGGAAGGAGTTTGAATTTGATAAGGTTTTCCCTCGAGAAGCAAACCAAGAAAGTGTTTTTGTGGAGGTCGAGCCAATTCTCAGATCTGCAATGGACGGACACAATGTGTGCGTTTTAGCTTATGGACAAACAGGCACCGGCAAGTCATTCACTATGAATGGCACAAACGAGCAGCCAGGAATTATTCCCCGAGCTCTTGAGGAGTTATTTCGGCAAGCCTCTCTAAAGGATTCATCATCTTTTACATTTTCAATGAGCATGTTAGAAGTCTACATGGGTAGTCTAAGAGATCTGCTGGCTCCGAGACCATGCGGTAGAGCATATGAACCTGTGACTAGATGCAATCTCAACATTCAAACAGATCCAAAGGGATTGGTCGAAATTGAAGGTCTCTCGGAAGTGCAAATCTCAGATTCTGCTAAAGCCAGATGGTGGTACAACAAGGGTAGAAGAGCAAGATCCACTTCATGGACTAATGTGAATGAAGCATCGAGCAGGTCACACTGCTTGACAAGGATCACCATATCCCGTCGTGGATACGCTTTGGAAGGCAAAAGGGAAAGAAGCAAGTTGTGGATGGTTGATCTCGGAGGAAGCGAGCGGTTACTCAAAACTGGAGCCATAGGATTAACACTTGATGAGGGCCGAGCCATTAATCTTTCTCTTTCTGCTTTAGCTGATGTCATTGCAGCTTTGAGGAGTAAGAGGAGTCATGTGCCTTACAGAAATAGCAAGCTAACTCAAATACTCAAAGATTCTTTAGGTAATGGTTCGAAGGTCTTGATGCTTGTGCACATAAGCCCTTCCGAGGAAGATGCTTGTGAGACGATGTGTTCTTTAAACTTTGCAAAGAGGGCAAGAGCAACAGAGTACAACAAAGAAATACCAGAGGAATTGAGAAAGCAAAAGGAGAAGAAGATCCTGAAGCTTGAGGAAGAGATGAGGGAAGCTGAAAAGGAACACCAGAAACTTAGGGATCGAATTCAGGAGGCTGAGTTCAAGTTAGGCGAACAAAAAAAGGTCTTCTCAGCTACATATAAGCCTCTGGAAAACAATGACAGTGCCCCTATAAGCCCTAAAAATAATGTGAAAGAGGTCACTGAAAACCCGAAAGCATCTAAGAAATATATTAAAAGAAAAATATCGAATTCTATGCCTCGATTCATGACTTCCACCGTTGCCAGTCGCCAAAGGCAAAGTGCTTCGGAAAAAGAGCTTGTTGGAAGATCAAGAAGTTTAAGTTCAGCGATCACTAGGGGTTCCCTCAAGTTTTCAGGTTCTCAATCACTGAACTGCTCGGATCTCCGCTTGAAAGCAGTAATACAGAATTCAACTGGAAAATCTCGGCTTGGTGAAACCACGGGCGAGAGTCCTAAATGCAGCGGTTTGGAATCAAAAACCACCAATCCTGGAAGCAGGATGTTCACTTCATCGGATCCTAACGTGGTAGTTATGTTACGTCGTCATAGAAGAAGAATGTCCGATCTGATCTGA 1923 0.4363 MFISSEEQILFHSEHASEAVIEAFKSTSSNLNPDSVNGSPAVAEFPHSPPVSTIYTDVGVIPEHEKNELEQLISNLERGVKQLRNEQCIFDKKRREALSKILDIKGSIRVFCRVRPFLLAEKRRTSEPVSAASERIRVKLGGTRKEFEFDKVFPREANQESVFVEVEPILRSAMDGHNVCVLAYGQTGTGKSFTMNGTNEQPGIIPRALEELFRQASLKDSSSFTFSMSMLEVYMGSLRDLLAPRPCGRAYEPVTRCNLNIQTDPKGLVEIEGLSEVQISDSAKARWWYNKGRRARSTSWTNVNEASSRSHCLTRITISRRGYALEGKRERSKLWMVDLGGSERLLKTGAIGLTLDEGRAINLSLSALADVIAALRSKRSHVPYRNSKLTQILKDSLGNGSKVLMLVHISPSEEDACETMCSLNFAKRARATEYNKEIPEELRKQKEKKILKLEEEMREAEKEHQKLRDRIQEAEFKLGEQKKVFSATYKPLENNDSAPISPKNNVKEVTENPKASKKYIKRKISNSMPRFMTSTVASRQRQSASEKELVGRSRSLSSAITRGSLKFSGSQSLNCSDLRLKAVIQNSTGKSRLGETTGESPKCSGLESKTTNPGSRMFTSSDPNVVVMLRRHRRRMSDLI 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3902 640 SMART kinesin_4 105 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 Pfam Kinesin motor domain 113 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 PRINTS Kinesin heavy chain signature 176 197 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 61 434 - -
Prci3g3902 640 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 564 IPR027640 GO:0003777|GO:0007018
Prci3g3902 640 MobiDBLite consensus disorder prediction 533 555 - -
Prci3g3902 640 ProSiteProfiles Kinesin motor domain profile. 107 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci3g3902 640 MobiDBLite consensus disorder prediction 590 620 - -
Prci3g3902 640 Coils Coil 66 86 - -
Prci3g3902 640 Coils Coil 443 477 - -
Prci3g3902 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 471 IPR027417 -
Prci3g3902 640 Gene3D Kinesin motor domain 102 477 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3902 Prci-Chr3 47214617 47218724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3902 94 430 Calmodulin-binding Proteins AT5G65930 40.643 7.99e-72 250
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3902 3 47214617 47218724 Prci3g3902 3 47214617 47218724 ECH