Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3878 ATGGCTTTTGATTTGAGTTCCGTTTTCCCGAAATTGCAACTGCTAGTGACTTCTGATCATGCTTCCGTGGTCTCCATGAACCTATTTGTGGCACTCCTGTGTGCTTGTATTGTGATTGGCCATCTTCTCGAGGAGAATCGATGGATGAATGAGTCCATCACCGCCCTTTTGATTGGTCTTTGCACAGGCGTTGTTATTTTGCTGATAAGGGGTGGTCAAAGCTCCCATCTTCTTGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCAGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTGTAAATTTCATCACTATTGTGCTGTTTGGTGCTGTTGGTACATTAATATCTTGTGCCATCATAACTTTTGGTGTTACACAAGTTTTTAGAAAGATGGGCATTGGTCCACTTGAGATAGGGGATTATCTAGCAATTGGTGCAATATTTGCCGCTACAGATTCTGTGTGCACATTGCAGGTGTTAAATCAGGACGAGACACCTTTACTCTACAGCCTTGTGTTTGGAGAGGGTGTTGTGAACGATGCTACATCTGTCGTGCTTTTCAATGCAATCCAAGGCTTTGACCTCAACAAACTAGACTCTGGAATTGCTTTAAACTTTCTTGGCAACTTTCTGTACCTCTTTATTGCAAGCACATTGCTTGGTGTTTTGACTGGTCTGCTTAGTGCTTATATTATTAAAAAGCTATATATTGGCAGGCACTCCACAGATCGTGAAGTTGCTCTAATGATGCTGATGGCATACCTTTCCTACATGCTGGCTGAATTATGCTATCTGAGTGGTATCCTCACTGTATTCTTCTGTGGGATTGTAATGTCTCATTATACTTGGCATAACGTGACTGAGAGTTCCAGAGTCACTACAAAGCATGCCTTTGCTACCTTGTCGTTTGTTGCCGAGACATTCATCTTCCTTTATGTTGGTATAGATGCCTTGGACATTGAAAAATGGATGTTTGTTAGTGATAGTCCTGGAAAGTCAATAGCAGTGAGCTCAGTGTTGTTGGGTCTAGTACTCACTGGAAGAGCAGCTTTTGTTTTCCCCCTATCCTTCTTGTCCAACTTGGCTAAAAAGTCGCCAACTGAGAGAATCAATTTCAGGCAGCAAGTGATCATATGGTGGGCTGGTCTGATGAGAGGTTCTGTTTCAATGGCGCTCGCGTATAATCAGTTCACCATGTCGGGCCATACTCAATTGCGATCCCATGCAATGATGATCACTAGCACAATCACAGTTGTGCTCTTCAGCACAGTGGTCTTTGGTTTAATGACTAAGCCACTCATAAGGTATTTGCTGCCTAATGTTAAACACACAAGCAGCGTGGTCACAACGGAATCATCAACTCCAAAATCTTTTACCGTGCCACTTCTTGGGACTTCCCAAGATTCCGAAACTGATATTGATGGAAATTCAATTATTCGTCCAAGTAGCATTCGTTTATTACTCACCACTCCAACACACACGGTTCATTGCTACTGGCGTAAGTTTGATGACGCATTCATGCGCCCAGTTTTTGGAGGCAGGGGTTTTGTTCCTGTGGAGCCTGGCTCGCCTACTGAACGAAACGGTCATCAGTGGCAATGA 1626 0.4293 MAFDLSSVFPKLQLLVTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLCTGVVILLIRGGQSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAVGTLISCAIITFGVTQVFRKMGIGPLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQGFDLNKLDSGIALNFLGNFLYLFIASTLLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFIFLYVGIDALDIEKWMFVSDSPGKSIAVSSVLLGLVLTGRAAFVFPLSFLSNLAKKSPTERINFRQQVIIWWAGLMRGSVSMALAYNQFTMSGHTQLRSHAMMITSTITVVLFSTVVFGLMTKPLIRYLLPNVKHTSSVVTTESSTPKSFTVPLLGTSQDSETDIDGNSIIRPSSIRLLLTTPTHTVHCYWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGHQWQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3878 541 Gene3D - 146 197 - -
Prci3g3878 541 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci3g3878 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3878 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3878 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3878 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3878 541 PANTHER SODIUM/HYDROGEN EXCHANGER 18 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Prci3g3878 541 NCBIfam sodium/hydrogen exchanger 3 25 453 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3878 Prci-Chr3 47130158 47137256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3878 6 539 Antiporters AT3G05030 75.836 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3878 - - gmx:100816746 894.419