Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3830 ATGGCAAGTGTTAGCTGGAAGAGAGCTGGAATCACTGCTTTTCAGCACCGGGAATCCTTCCCTGCGAATGATACCTCTTGCTGTAACACTCTCCTCGAAATGGCTTTCCTTGAAGCCACGCCTCCCTCCTCACCACTTCCACTTTCTACTTCATATCTCGACACCAGCACCGTTATCGCCCTCTGTGTTTTCTTCGCTCTTCTCTGCGCTTGCATCGTTATCGGCCACCTTCTCGAAGAGAAACGGTGGGCCAATGAATCCATCACTGCACTCCTTCTGGGGTTGTGTTCTGGAGTGGTGGTCTTGCTGGTGACCAAGTTCAGTAATACTGAATTTTTCAAATTCAGCGAAGACTTGTTCTTTCTGTACTTGCTCCCTCCAATCATTTTTAATGCTGGTTTCCAAGTGAAGAAGAAGCAGTTCTTCAAGAATTTTTCAACTATTCTACTGTTTGGAGTCTGTGGAACTGTTATTTCATTCTGCTTCATATCATTTGGTGCCTTTTTTCTGCTCAGGAGGATAGGTCTAAGCTTGAATCTGCAAGATTACCTAGCCATCGGGGCCATATTCTCAGCAACTGATTCAGTTTGTACATTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCGTTGTATTTGGGGAGGGAGTTGTAAATGATGCAACCTCTATTGTACTTTATAATTCAGTCCAGTCCCTTGACTTCAGCAGCATTAGTGCTACTACAGCCCTGACATTGTTGGGGACATTTCTCTACCTCTTCCTCACTAGCACTGCCCTCGGTATATCTGTTGGCCTTTTGAGTGCTTTTACTATTAAAACACTTTATTTTGGAAGGCATTCTACAGATCGTGAAGTTGCGCTCATGATGCTTATGGCTTATTTATCATACATGATTGCTGAGCTTTTGAGTCTGAGTGGGATTTTGACAATTTTCTTTTGTGGCATTGTCATGTCCCACTACACATGGCACAACGTTACAGAAAGCTCAAGGATTACTACCAAGCATGCTTTTGCAACTATCTCATTCATCGCAGAAACTTTTATATTTGTATATGTTGGCATGGATGCTTTGGATCTTGAAAAATGGAAAACCAGCAACGCAAGCGTAGGGACTTCAATTGCTGTCAGCGCAACTTTCATGGCGTTAGTGCTGATTGGTAGGGCAGCTTTTGTGTTTCCTATTGTAAACATTAAAAACTGCATCAAGACACAAGAGAGTTCCAAAATAAATTTTCGATCGCAGTTTATAATATGGTGGGCAGGCCTATTGAGAGGCGCGGTGACTATCGCCTTGTGTTATTACCAGTTTGAGAAAGAGAGAGGGTCCACTCAAGCATGTGCAGTGGTTATCACCTCTACCATAGTCGTTGTGTTATTCAGTACCGCGGTGTTTGGTTCCATAACAAAGTCCTTGATTCAGGCGGTGCAGCTGAGGGATTCAAAACAAGCGATTTCTGAATCCACTGAAAATGCGGAGGATTTGAGATTCTTGTTCCTTGAAAATGCTGGTCCTAGTAACCAGGGCGACAATCAGTCAGATCGGAGGAGAAGCAGCCTAAGTTTACTGATAAGTCATCCGACGTCGACGGTTCACTACTTTTGGAGGAAATTTGACGATAAATATATGAGACCAATATTTGGTGGGAGGGGTTTTGTTCCATTCGCTCCTGTTTCGCCTTCTGACTCTAATGGAGCCGCGGATGCTCCTCCAGATCCAGACAATTAA 1734 0.4383 MASVSWKRAGITAFQHRESFPANDTSCCNTLLEMAFLEATPPSSPLPLSTSYLDTSTVIALCVFFALLCACIVIGHLLEEKRWANESITALLLGLCSGVVVLLVTKFSNTEFFKFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFSTILLFGVCGTVISFCFISFGAFFLLRRIGLSLNLQDYLAIGAIFSATDSVCTLQVLSQDETPFLYSVVFGEGVVNDATSIVLYNSVQSLDFSSISATTALTLLGTFLYLFLTSTALGISVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFVYVGMDALDLEKWKTSNASVGTSIAVSATFMALVLIGRAAFVFPIVNIKNCIKTQESSKINFRSQFIIWWAGLLRGAVTIALCYYQFEKERGSTQACAVVITSTIVVVLFSTAVFGSITKSLIQAVQLRDSKQAISESTENAEDLRFLFLENAGPSNQGDNQSDRRRSSLSLLISHPTSTVHYFWRKFDDKYMRPIFGGRGFVPFAPVSPSDSNGAADAPPDPDN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3830 577 PRINTS Na+/H+ exchanger signature 119 130 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3830 577 PRINTS Na+/H+ exchanger signature 148 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3830 577 PRINTS Na+/H+ exchanger signature 133 147 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3830 577 PRINTS Na+/H+ exchanger signature 187 197 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3830 577 NCBIfam sodium/hydrogen exchanger 3 61 499 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci3g3830 577 Pfam Sodium/hydrogen exchanger family 63 474 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci3g3830 577 Gene3D - 179 231 - -
Prci3g3830 577 PANTHER SODIUM/HYDROGEN EXCHANGER 53 549 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3830 Prci-Chr3 46937167 46943876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3830 48 573 Antiporters AT3G05030 59.665 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3830 K14724 - qsa:O6P43_026859 758.829