Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3784 ATGCAAATGCAAGACATCTTCGGATCAGTTCGCCGATCACTGGTATTTCGTACTTCGCCGGAGAACGAAGAAGCCTCACTTGGTGGAACCCTAGTTGATAAGATCAATTATTGCATCCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCGGCGTCTCCGCCATTGCCACCCATTACCAAGGAATCTTCGCCTATGATCCGATGGCGCAAGGGCGAGTTGATCGGATGCGGTGCCTTTGGTCGAGTTTACATGGGCATGAATCTTGATTCTGGGGAGCTTCTGGCAGTAAAACAAGTTCTGATCGCGGCTAGTAGCGCTTCGAAGGAGAAGGCACAGGCTCACATAAAGGAGCTTGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCTCATCCCAATATTGTTAGATATTTGGGTACAGTTAGGGAGGAGGACACCTTGAATATTCTTCTGGAGTTTGTCCCAGGTGGATCCATATCATCACTTTTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGTTATTAGAACTTTCACCAAGCAGTTACTGCTGGGACTTGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTTGATAATAAAGGATGCATAAAACTTGCTGATTTTGGGGCTTCCAAACAGGTTGTTGAGCTGGCTACCATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTTTCTGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAGATGGCCACCGGAAAACCTCCTTGGAGCCAGCAGTACCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACAAAGTCTCATCCCCCAATTCCGGATCATCTCTCTGCTGGAGCAAAAGATTTTCTATTAAAATGTTTGCAGAAGGAACCGGTCTTAAGGCCATCAGCATCGGAACTGCTGCAGCATCGCTTTGTTACTGGTGAACACACGAGTTCTCCTGGGTCATATGCAGCAATGGAAAAATTTGAAGCTTCTTCAGCATCATGTGCGTCTAACACCAAAACTCCGTCAACTGCACATCCTGAGGAAGAAGAAAATAAAGAGTATTGGGGAATGGACAATGATGACGACATGTGTGAGATTGATGACAAAGATGAGTTCTCTGAGGGGGCTGTTAAAGTTAGATCCTCCATGTCAGAAAATATCATGAGTTTCAACCCAATGTCTGAGCCCTCTGATGATTGGAGTTGCAAATTTGATGTGAGTCCAGAGCTGGATCATAGTGGAGTTAGTATTTGCACTGATGAAATGTACAAGCCTCCTGGCCACCCGGAGGCTTTCCAAGAGGAGCAAAAAGATTTTTCCTTTGCAGGCGAAGCATCAGTGTCTGAGGATGATGATGAACTCACGGAGTCAAAAATACAAGCTTTTCTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACGCCTTTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGTTCTCCCAATGCGGTTGAAACCACAAATGACGAAACTACTCCAAAGTTCTTGGCATTACCTCCTAAAAGCAGGTCCCCGAATCGGGTGCCAATTGGCACCCCATCAAAAGCAATTGACCATACTGAAAGTCCTGGAAGTAATGGCAGGTCCTCCCCAAATGTTGGCAATGCAACTGATCATAATTCACATGACATACCATCACCGCCCCTCAATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTCTAGCCCAAGTTTAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAACTTGACCAGGAGCTTGAGAGAAAGCGCGAAATGATGCGTCAAGCTGGTATCGGAGGGAAAACATCATCACCAAAGGATCGAGCCTTAAATCGGCAGAGAGAACGGACAAGATTTGCATCACCAAGCAAATAA 1962 0.4546 MQMQDIFGSVRRSLVFRTSPENEEASLGGTLVDKINYCIRKSRVFSKPSPASPPLPPITKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTFTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPVLRPSASELLQHRFVTGEHTSSPGSYAAMEKFEASSASCASNTKTPSTAHPEEEENKEYWGMDNDDDMCEIDDKDEFSEGAVKVRSSMSENIMSFNPMSEPSDDWSCKFDVSPELDHSGVSICTDEMYKPPGHPEAFQEEQKDFSFAGEASVSEDDDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNAVETTNDETTPKFLALPPKSRSPNRVPIGTPSKAIDHTESPGSNGRSSPNVGNATDHNSHDIPSPPLNEWKGLLVDSQQEPSSPSLSFSERQRKWKEELDQELERKREMMRQAGIGGKTSSPKDRALNRQRERTRFASPSK 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3784 653 MobiDBLite consensus disorder prediction 587 601 - -
Prci3g3784 653 MobiDBLite consensus disorder prediction 352 377 - -
Prci3g3784 653 MobiDBLite consensus disorder prediction 506 523 - -
Prci3g3784 653 MobiDBLite consensus disorder prediction 602 624 - -
Prci3g3784 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 58 337 - -
Prci3g3784 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Prci3g3784 653 SUPERFAMILY Protein kinase-like (PK-like) 67 331 IPR011009 -
Prci3g3784 653 FunFam Serine/threonine-protein kinase STE11 64 158 - -
Prci3g3784 653 ProSiteProfiles Protein kinase domain profile. 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3784 653 Gene3D Transferase(Phosphotransferase) domain 1 67 372 - -
Prci3g3784 653 CDD STKc_MAPKKK 67 330 - -
Prci3g3784 653 Coils Coil 604 624 - -
Prci3g3784 653 SMART serkin_6 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3784 653 MobiDBLite consensus disorder prediction 548 574 - -
Prci3g3784 653 MobiDBLite consensus disorder prediction 636 653 - -
Prci3g3784 653 Pfam Protein kinase domain 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3784 653 FunFam Mitogen-activated protein kinase kinase kinase 2 67 359 - -
Prci3g3784 653 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Prci3g3784 653 MobiDBLite consensus disorder prediction 506 653 - -
Prci3g3784 653 Coils Coil 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3784 Prci-Chr3 46683725 46689702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3784 3 653 MAP Kinase Kinase Kinase AT1G54960 56.509 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci3g3784 Pkinase 9.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3784 K20606 - gmx:100779001 1012.68