Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3773 ATGGCACCAACAAGGAAATCGAGAAGTGTGAATAAACGGTTTTCAGGTTTAAATGAGGTCTCTCCTGATAAAGATGGAGTTAATTCAAATAAAAATAAGCATCGGAAGAAAAAGTTGTCTGACAAGCTGGGATCTCAATGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGCATGGGAAAGATTGGAAAAAGGTATCTGTTGCTGTGCGGAACAGATCCACTGAAATGGTGGAGGCTCTGTATAATATGAATAGGGCATATTTATCTCTTCCAGAGGGAACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACCGATCATTATAATGTGCTGGAAGGGAGTGATAGTGATAAGGATAGCAGTGATGCACCAGAATCTCAAAAACCTTTGAAACGGAAGCGTGGGAAAGTTCAGCTTAGTTTTTCTAAAGATTCTGTTCAAAGTCATTCAGCTGCTTCTAATGATGGTTGTCTTTCTTTATTGAAGAAAAGACACTTTGATGGTAGCCAGCCTCGTGCAGTAGGAAAACGAACGCCTCGCATCCCAGTTTCCCACTCTCATAAAAAATTTGATAGGGAAAATTTTGTTTCACCAATTAAAAGAAGCCTGAAGTCAGAGAGTAATGCTAATGATGATGAAGTTGCTCATGTTGCAGCGCTGGCTTTAACTGAGGCTGCACAAAGAGGAGGCTCTCCTTGTATTTCTCAAACGCAATACAGAAGAGCAGAGCAGAAACCCTCTCCTGTTCAAAGCTGGGAAAGAATGCAGTCAAAGACAGCTCGTGCCAAGTTTCATGATGCTTCCGTGGGTGAAGATTGCTTGGAAGGTAGTGTAGAAAGTGGTGAGGCTGAAAATGGAGAATATGCTAGAGATACTAGTTCATTAATGAACATGGAAGGCGTTGGCACAGTTGAAGTACATCAGAAGGGGAAGAAAATTTACAGAAAGAAAGAGAGAGCAGAAAATGTTCGGAATTATCAGCTTGATGATGGTGGGGAAGCATGCAGTGGCACTGAAGGAGGACTTTATTTTAATTCTTTGAAGGAAAAGGTTGATAGTGAGGTTATTAATGCCAAACCTGAGCAATTCTCACCTAAAGGTCAGGGGAAACGAAGCAAAAAACTTTTCTTTGGAGATGAAAGCTCTGCCTTGGATGCTTTACAAACTTTGGCTGATCTGTCTTTAATGATGCCTGTGTCCACCATGGATTCTGAGGCATCTGTCCAGTTGAAGGAAGAAAGAACGCCTGTTGATAAAGATGATAAATCTGCTTTGCCTGAAACTACGTTTACAAGCCAAAACAGAGACAAACTTAAACTCCCTGGTCCAAAACAAAAGGTTCATGCAGTTCCTGGAATTGAGACTTCAAACTCAAGAAAATCTAAACTTGGACGGGAGCTAGAAAATGAAACGAATGCTTCAGCTGAATCAAAAGAACAGATAACACCTGATAGAACATCAAAAAGAAAGCGCAAGTCTGCAGTCTCAAAGGCTGTATCTGATGAAGAGAATAAACTGCTGATTAAAGCAAAACAAGTGAAACCAGTCAGATCATCTGAGAGCTCCTTGTGTAGTGATCCAAAAGATTTAACAGTATCAACTGCAGAAGTACCACTTGCAAGTGAAGTTAGTTTACCAAATAAAAAAAATAGACGTAAGATGAGCCTACAGAAGACATTCATTATGAAAGAGAAATCTTCTGAAAACATGTTGAGAAAACCTAATAAATACTCTTCCAGCCTTCCAGACAGGACTTCATATTTAAAGGAAAAGCTTTCTGGTTGCTTGTCGTCATATATGGTTCGCAGGTGGTGTACTTTTGAGTGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAACCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTTATAAAAAGTTCCCTGGGGAAACCTCGTAGGTTTTCTGAGCACTTTCTCCGTGAAGAAAGACAAAAACTTGAACAGTACAGGGAATCTGTGAGGAAACATTACACTGAACTGCGCACTGGTATGAGGGATGGACTCCCAACAGATTTAGCAAGACCTTTGTTTGTTGGACAACGAGTAATTGCTATTCACCCCAAATCAAGAGAGGTTCATGATGGGAGTGTGCTTACTGTTGACCATGACAAGTGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCTATGAATCCTGTGGATAATATGCCAGAAGCTCTGAGAAGACAGATAGGTGTTGGCAAAGTTTCTTATATGGGCAAACAGCTACAGATAAATGAAATTTCTAATTTTGAGGGTGGTGTGGCATGTGGTTCAGGTGGACCCCTGGAGAAGCTATCCACATCCACCCCTTCAAGTACTTTTGCAAAGGTGGGCAAGGAGGATGTTAATCCTGTTGCTCAAGCAAAGGTTGGAACCATTGATAACATTGATACACTACAAGAAGCATATGCTCAACCTTGTACATTCACACATCATCAAGCCAGAGAAGCTGATATACACGCCCTTTCTGAACTGACTCGTGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATATTGGAAAACCAAAATGACGTAGACTACTTCAAAGGTTCAGAGTCTTTCAAGAAGCATTACGCCACGGTTTCGTCTGCTCTGCTTAGTTTGAGGCAACGAAATACTTACACTGGAAACTCTCCATCACCATGGGTGAAGGCCCCAGCAAGCTTCAATATCCAAGATGATCTTCTGTGTGCATTAGATAGTTCTCTAACACAACAGTTAGCATCAAGTGTCATTGAAATTATCAAAGGATCCAGGCTAAGAGCACATGCCATGGTAGATACTGCAATTCAGACGTTGTCTTCGACAAAAGAAGGTGAAGATGCTTTCATGAGGATAGGCCAAGCATTGGATTCCATTGATTATCAGCAGTTGGCCTTCAACTCTAGGTTACCTGTAATAAGATCCCAAGAGCAAGTGAATAGCAGTTTTGGTCACCATGATCAGTCGACTTGCGGTGCATCAGAAACTCTACATAGTGATACATCAGGTCCAAAATTGCAGAATGACTCCCACAAAGTTGATATTCAAATTCCTTCGGAGCTCATCACATCCTGTGTTGCTACTTTAATCATGATTCAGACTTGTACTGAACGGCAATACCCACCAGCTGATGTTGCTCAGATTTTAGATTCAGCCGTTAACAGCCTGCATCCTTGCTGCCCTCAAAACCTTCCTATATACAGAGAAATTAAGATGTGCATGGGACGAATCAAGACCCAGATTTTAGCTCTCATCCCAACTTGA 3384 0.4116 MAPTRKSRSVNKRFSGLNEVSPDKDGVNSNKNKHRKKKLSDKLGSQWSKEELERFYEAYRKHGKDWKKVSVAVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSDKDSSDAPESQKPLKRKRGKVQLSFSKDSVQSHSAASNDGCLSLLKKRHFDGSQPRAVGKRTPRIPVSHSHKKFDRENFVSPIKRSLKSESNANDDEVAHVAALALTEAAQRGGSPCISQTQYRRAEQKPSPVQSWERMQSKTARAKFHDASVGEDCLEGSVESGEAENGEYARDTSSLMNMEGVGTVEVHQKGKKIYRKKERAENVRNYQLDDGGEACSGTEGGLYFNSLKEKVDSEVINAKPEQFSPKGQGKRSKKLFFGDESSALDALQTLADLSLMMPVSTMDSEASVQLKEERTPVDKDDKSALPETTFTSQNRDKLKLPGPKQKVHAVPGIETSNSRKSKLGRELENETNASAESKEQITPDRTSKRKRKSAVSKAVSDEENKLLIKAKQVKPVRSSESSLCSDPKDLTVSTAEVPLASEVSLPNKKNRRKMSLQKTFIMKEKSSENMLRKPNKYSSSLPDRTSYLKEKLSGCLSSYMVRRWCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGMRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPMNPVDNMPEALRRQIGVGKVSYMGKQLQINEISNFEGGVACGSGGPLEKLSTSTPSSTFAKVGKEDVNPVAQAKVGTIDNIDTLQEAYAQPCTFTHHQAREADIHALSELTRALDKKEKLLMELRNANNDILENQNDVDYFKGSESFKKHYATVSSALLSLRQRNTYTGNSPSPWVKAPASFNIQDDLLCALDSSLTQQLASSVIEIIKGSRLRAHAMVDTAIQTLSSTKEGEDAFMRIGQALDSIDYQQLAFNSRLPVIRSQEQVNSSFGHHDQSTCGASETLHSDTSGPKLQNDSHKVDIQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3773 1127 MobiDBLite consensus disorder prediction 116 136 - -
Prci3g3773 1127 Pfam DIRP 613 714 IPR033471 -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 463 477 - -
Prci3g3773 1127 SMART sant 43 91 IPR001005 -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 411 429 - -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 1 44 - -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 485 505 - -
Prci3g3773 1127 Coils Coil 860 890 - -
Prci3g3773 1127 PANTHER LIN-9 1 1127 IPR010561 GO:0006351|GO:0017053
Prci3g3773 1127 MobiDBLite consensus disorder prediction 116 156 - -
Prci3g3773 1127 Coils Coil 666 686 - -
Prci3g3773 1127 SMART DIRP_2 614 715 IPR033471 -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 408 505 - -
Prci3g3773 1127 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 1 16 - -
Prci3g3773 1127 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Prci3g3773 1127 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Prci3g3773 1127 MobiDBLite consensus disorder prediction 1023 1049 - -
Prci3g3773 1127 Gene3D - 4 99 - -
Prci3g3773 1127 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Prci3g3773 1127 CDD SANT 47 81 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3773 Prci-Chr3 46610096 46621200 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci3g3773 DIRP 5.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3773 - - qsa:O6P43_011108 1496.87