Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3771 ATGGCACCAACAAGGAAATCGAGAAGTGTGAATAAACGGTTTTCAGGTTTAAATGAGGTCTCTCCTGATAAAGATGGAGTTAATTCAAATAAAAATAAGCATCGGAAGAAAAAGTTGTCTGACAAGCTGGGATCTCAATGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGCATGGGAAAGATTGGAAAAAGGTATCTGTTGCTGTGCGGAACAGATCCACTGAAATGGTGGAGGCTCTGTATAATATGAATAGGGCATATTTATCTCTTCCAGAGGGAACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACCGATCATTATAATGTGCTGGAAGGGAGTGATAGTGATAAGGATAGCAGTGATGCACCAGAATCTCAAAAACCTTTGAAACGGAAGCGTGGGAAAGTTCAGCTTAGTTTTTCTAAAGATTCTGTTCAAAGTCATTCAGCTGCTTCTAATGATGGTTGTCTTTCTTTATTGAAGAAAAGACACTTTGATGGTAGCCAGCCTCGTGCAGTAGGAAAACGAACGCCTCGCATCCCAGTTTCCCACTCTCATAAAAAATTTGATAGGGAAAATTTTGTTTCACCAATTAAAAGAAGCCTGAAGTCAGAGAGTAATGCTAATGATGATGAAGTTGCTCATGTTGCAGCGCTGGCTTTAACTGAGGCTGCACAAAGAGGAGGCTCTCCTTGTATTTCTCAAACGCAATACAGAAGAGCAGAGCAGAAACCCTCTCCTGTTCAAAGCTGGGAAAGAATGTCAAAGACAGCTCGTGCCAAGTTTCATGATGCTTCCGTGGGTGAAGATTGCTTGGAAGGTAGTGTAGAAAGTGGTGAGGCTGAAAATGGAGAATATGCTAGAGATACTAGTTCATTAATGAACATGGAAGGCGTTGGCACAGTTGAAGTACATCAGAAGGGGAAGAAAATTTACAGAAAGAAAGAGAGAGCAGAAAATGTTCGGAATTATCAGCTTGATGATGGTGGGGAAGCATGCAGTGGCACTGAAGGAGGACTTTATTTTAATTCTTTGAAGGAAAAGGTTGATAGTGAGGTTATTAATGCCAAACCTGAGCAATTCTCACCTAAAGGTCAGGGGAAACGAAGCAAAAAACTTTTCTTTGGAGATGAAAGCTCTGCCTTGGATGCTTTACAAACTTTGGCTGATCTGTCTTTAATGATGCCTGTGTCCACCATGGATTCTGAGGCATCTGTCCAGTTGAAGGAAGAAAGAACGCCTGTTGATAAAGATGATAAATCTGCTTTGCCTGAAACTACGTTTACAAGCCAAAACAGAGACAAACTTAAACTCCCTGGTCCAAAACAAAAGGTTCATGCAGTTCCTGGAATTGAGACTTCAAACTCAAGAAAATCTAAACTTGGACGGGAGCTAGAAAATGAAACGAATGCTTCAGCTGAATCAAAAGAACAGATAACACCTGATAGAACATCAAAAAGAAAGCGCAAGTCTGCAGTCTCAAAGGCTGTATCTGATGAAGAGAATAAACTGCTGATTAAAGCAAAACAAGTGAAACCAGTCAGATCATCTGAGAGCTCCTTGTGTAGTGATCCAAAAGATTTAACAGTATCAACTGCAGAAGTACCACTTGCAAGTGAAGTTAGTTTACCAAATAAAAAAAATAGACGTAAGATGAGCCTACAGAAGACATTCATTATGAAAGAGAAATCTTCTGAAAACATGTTGAGAAAACCTAATAAATACTCTTCCAGCCTTCCAGACAGGACTTCATATTTAAAGGAAAAGCTTTCTGGTTGCTTGTCGTCATATATGGTTCGCAGGTGGTGTACTTTTGAGTGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAACCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTTATAAAAAGTTCCCTGGGGAAACCTCGTAGGTTTTCTGAGCACTTTCTCCGTGAAGAAAGACAAAAACTTGAACAGTACAGGGAATCTGTGAGGAAACATTACACTGAACTGCGCACTGGTATGAGGGATGGACTCCCAACAGATTTAGCAAGACCTTTGTTTGTTGGACAACGAGTAATTGCTATTCACCCCAAATCAAGAGAGGTTCATGATGGGAGTGTGCTTACTGTTGACCATGACAAGTGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCTATGAATCCTGTGGATAATATGCCAGAAGCTCTGAGAAGACAGATAGGTGTTGGCAAAGTTTCTTATATGGGCAAACAGCTACAGATAAATGAAATTTCTAATTTTGAGGGTGGTGTGGCATGTGGTTCAGGTGGACCCCTGGAGAAGCTATCCACATCCACCCCTTCAAGTACTTTTGCAAAGGTGGGCAAGGAGGATGTTAATCCTGTTGCTCAAGCAAAGGTTGGAACCATTGATAACATTGATACACTACAAGAAGCATATGCTCAACCTTGTACATTCACACATCATCAAGCCAGAGAAGCTGATATACACGCCCTTTCTGAACTGACTCGTGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATATTGGAAAACCAAAATGACGTAGACTACTTCAAAGGTTCAGAGTCTTTCAAGAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCGTCTGCTCTGCTTAGTTTGAGGCAACGAAATACTTACACTGGAAACTCTCCATCACCATGGGTGAAGGCCCCAGCAAGCTTCAATATCCAAGATGATCTTCTGTGTGCATTAGATAGTTCTCTAACACAACAGTTAGCATCAAGTGTCATTGAAATTATCAAAGGATCCAGGCTAAGAGCACATGCCATGGTAGATACTGCAATTCAGACGTTGTCTTCGACAAAAGAAGGTGAAGATGCTTTCATGAGGATAGGCCAAGCATTGGATTCCATTGATTATCAGCAGTTGGCCTTCAACTCTAGGTTACCTGTAATAAGATCCCAAGAGCAAGTGAATAGCAGTTTTGGTCACCATGATCAGTCGACTTGCGGTGCATCAGAAACTCTACATAGTGATACATCAGGTCCAAAATTGCAGAATGACTCCCACAAAGTTGATATTCAAATTCCTTCGGAGCTCATCACATCCTGTGTTGCTACTTTAATCATGATTCAGACTTGTACTGAACGGCAATACCCACCAGCTGATGTTGCTCAGATTTTAGATTCAGCCGTTAACAGCCTGCATCCTTGCTGCCCTCAAAACCTTCCTATATACAGAGAAATTAAGATGTGCATGGGACGAATCAAGACCCAGATTTTAGCTCTCATCCCAACTTGA 3414 0.4124 MAPTRKSRSVNKRFSGLNEVSPDKDGVNSNKNKHRKKKLSDKLGSQWSKEELERFYEAYRKHGKDWKKVSVAVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSDKDSSDAPESQKPLKRKRGKVQLSFSKDSVQSHSAASNDGCLSLLKKRHFDGSQPRAVGKRTPRIPVSHSHKKFDRENFVSPIKRSLKSESNANDDEVAHVAALALTEAAQRGGSPCISQTQYRRAEQKPSPVQSWERMSKTARAKFHDASVGEDCLEGSVESGEAENGEYARDTSSLMNMEGVGTVEVHQKGKKIYRKKERAENVRNYQLDDGGEACSGTEGGLYFNSLKEKVDSEVINAKPEQFSPKGQGKRSKKLFFGDESSALDALQTLADLSLMMPVSTMDSEASVQLKEERTPVDKDDKSALPETTFTSQNRDKLKLPGPKQKVHAVPGIETSNSRKSKLGRELENETNASAESKEQITPDRTSKRKRKSAVSKAVSDEENKLLIKAKQVKPVRSSESSLCSDPKDLTVSTAEVPLASEVSLPNKKNRRKMSLQKTFIMKEKSSENMLRKPNKYSSSLPDRTSYLKEKLSGCLSSYMVRRWCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGMRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPMNPVDNMPEALRRQIGVGKVSYMGKQLQINEISNFEGGVACGSGGPLEKLSTSTPSSTFAKVGKEDVNPVAQAKVGTIDNIDTLQEAYAQPCTFTHHQAREADIHALSELTRALDKKEKLLMELRNANNDILENQNDVDYFKGSESFKKHYATVLVQLKEASGQVSSALLSLRQRNTYTGNSPSPWVKAPASFNIQDDLLCALDSSLTQQLASSVIEIIKGSRLRAHAMVDTAIQTLSSTKEGEDAFMRIGQALDSIDYQQLAFNSRLPVIRSQEQVNSSFGHHDQSTCGASETLHSDTSGPKLQNDSHKVDIQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3771 1137 MobiDBLite consensus disorder prediction 410 428 - -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 116 136 - -
Prci3g3771 1137 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Prci3g3771 1137 SMART sant 43 91 IPR001005 -
Prci3g3771 1137 Coils Coil 665 685 - -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 1 44 - -
Prci3g3771 1137 Gene3D - 4 99 - -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 407 504 - -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 116 156 - -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 484 504 - -
Prci3g3771 1137 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Prci3g3771 1137 Coils Coil 859 889 - -
Prci3g3771 1137 Pfam DIRP 612 713 IPR033471 -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 1033 1059 - -
Prci3g3771 1137 PANTHER LIN-9 1 1137 IPR010561 GO:0006351|GO:0017053
Prci3g3771 1137 MobiDBLite consensus disorder prediction 1 16 - -
Prci3g3771 1137 SMART DIRP_2 613 714 IPR033471 -
Prci3g3771 1137 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Prci3g3771 1137 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Prci3g3771 1137 CDD SANT 47 81 IPR001005 -
Prci3g3771 1137 MobiDBLite consensus disorder prediction 462 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3771 Prci-Chr3 46610096 46621200 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci3g3771 DIRP 5.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3771 - - qsa:O6P43_007510 1494.18