Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3769 ATGTTTGCTTCAGTAGCGGATTCAGGACGTGAAAGTAGTGGAGCGTCAGGATCCAATTTGATTCCAAAGCGGTTCGTCTGGCCTTACGGGGGAAGAAGGGTGTTTCTTAGCGGCTCTTTCACAAGGTGGTCTGAACATCTACCCATGTCTCCTATGGAGGGATGTCCTACTGCATTTCAAGTTATTTGCAGCTTAATGCCGGGATATCATCAGTACAAATTTAATGTGGATGGCGAGTGGCAGCATGATGAGCATCAACCATTTGTAAGTGGGAGCTATGGAGTAGTGAATACTATTTTTTTGACTAGAGGACCAGATGCTTTGCCTTCCATCTTTGCTCCTGGGATACCCGGCAGAGCCCGCATGGAGGTTGATAATGATGTCTTTGGGCTTATGGAAACTAATTCAAGGATGTCAGAGTCTGATCTGGAGGTCTCACGCCACCGTATAGCTGTATTCTTGTCTACATATACTGCTTATGAGTTGCTTCCTGAGTCAGGCAAGGTCATCGCCTTTGATATCAACTTACCAGTTAAGCAAGCATTCCATGTTCTTTATGAACAGGGCATACCCATGGCTCCTTTATGGGATTTTCACAAGGCCCAGTTTGTTGGAGTGCTTAGTGCTATGGATTTCATTCTAATATTGAAAGAGCTGGGCAATCGGGGGTCAACTTTGACTGAAGAACAACTTGAGACTCATACTATAGCAGCATGGAAAGAGGTAAAGTCACAACAACGCAGGACAATGGACAATGGGAGATCGTATCCTCAGCACTTTGTTCATACTGGGCCTCATGAGTGTCTGAAAGATGTGGCTTTGAAAATTTTACAAAACAATGTGGCAGCGGTTCCTATTATTCACTCTACTTCACAGGATGGTTCATTTCCTCAGCTGCTACATCTTGCTTCCTTATCAGATATACTAAAATGTATTTGCAGGCACTTTAAGCATTCCTCTAGTTCCTTGCCCATTCTTCATCTACCAATTGGTTCAATACCTTTGGGTACGTGGGTGCCAAGAGTTGGGGAACCAAATAGACAGCCGCTTGCAATGCTTAGGCCGAATGCATCTCTAGCTGCCGCCCTGTCTCTGTTAATTCAAGCTTTAGGTCTTTTATGTGAAATTACTTCACGTTTGCAGCTGAAGTTAGTTCAATACCGATTGTGGATGATAATGATTCGTTGCTTGACATATATTCAAGGAGTGATATTACTGCATTGGCTAAAGATAGAGCTTATGCGCGGATATCCATCGATGAAATTAGTGTGCATCAGGCATTGCTTTCGGGACAAAATGCAAATTCACCTTGTGGCTTTTACAATGGTCAGAGGTGTCATATGTGTTTAA 1350 0.4348 MFASVADSGRESSGASGSNLIPKRFVWPYGGRRVFLSGSFTRWSEHLPMSPMEGCPTAFQVICSLMPGYHQYKFNVDGEWQHDEHQPFVSGSYGVVNTIFLTRGPDALPSIFAPGIPGRARMEVDNDVFGLMETNSRMSESDLEVSRHRIAVFLSTYTAYELLPESGKVIAFDINLPVKQAFHVLYEQGIPMAPLWDFHKAQFVGVLSAMDFILILKELGNRGSTLTEEQLETHTIAAWKEVKSQQRRTMDNGRSYPQHFVHTGPHECLKDVALKILQNNVAAVPIIHSTSQDGSFPQLLHLASLSDILKCICRHFKHSSSSLPILHLPIGSIPLGTWVPRVGEPNRQPLAMLRPNASLAAALSLLIQALGLLCEITSRLQLKLVQYRLWMIMIRCLTYIQGVILLHWLKIELMRGYPSMKLVCIRHCFRDKMQIHLVAFTMVRGVICV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3769 449 Pfam Glycogen recognition site of AMP-activated protein kinase 21 100 IPR032640 -
Prci3g3769 449 FunFam Sucrose nonfermenting 4-like protein 18 102 - -
Prci3g3769 449 SUPERFAMILY CBS-domain pair 148 318 IPR046342 -
Prci3g3769 449 Gene3D - 139 322 IPR046342 -
Prci3g3769 449 SUPERFAMILY E set domains 19 101 IPR014756 -
Prci3g3769 449 CDD E_set_AMPKbeta_like_N 24 100 - -
Prci3g3769 449 Gene3D Immunoglobulins 21 107 IPR013783 -
Prci3g3769 449 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 137 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3769 Prci-Chr3 46600499 46609496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3769 30 162 Protein tyrosine phosphatase (PTP) family AT3G52180 27.737 3.50e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3769 - - qsa:O6P43_011107 561.222