Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3767 ATGTCAAACATCACGAGCCGTGACAGTGGGAGTTTCTCCCCAGAGAATACCAGAGAAGATGCAGTTATTAAACAGCATCCTCATCGTCATCACTTTCACAGTTCGGGTTCTCTTACTTCAACCACCACTAACAGCAACGGTTCCAATGCCAATTCCCAGCTGCCTCCTCCTCCTCCTCCTCCTAAGAAGAAAAGAAGCCTCCCAGGAAATCCTGATCCAAGTGCTGAAGTGATTGCTCTATCACCGAACACCCTGATGGCGAGAAACCGATTCGTGTGTGAAATCTGCAACAAAGGATTCCAAAGGGATCAGAACCTGCAATTGCACCGGAGAGGCCATAACCTGCCATGGAAGCTTAAACAGAGGCCGACCACAGAGGTTCGAAAGCGTGTTTATGTTTGTCCAGAGCCTTCGTGCGTCCACCATAACCCAGCACGAGCACTGGGTGACCTTACTGGCATTAAGAAACATTTCTCAAGAAAACATGGCGAGAAGAAATGGAAGTGCGAAAAGTGCTCTAAGAGATACGCAGTCCAATCCGACTGGAAAGCCCATTCTAAGATCTGTGGCACTAGGGAATACAAATGTGACTGTGGCACCATCTTCTCCAGAAGAGATAGCTTTATCACCCATAGAGCTTTCTGTGACGCGTTGGCCGAGGAGAATAATAAAGCCAACAATGAAGGACTGCTAGGGCCAAAATTATTGGGTCCAAATTCAAACTCACAAGGTCAACATCAAATCCCAAGTCTCGTTTCTTCAATGCCAATCAACACCAACTTCAACCCACAAAACGGGACGCCCCACTTTGACCACCCCGATGAAATTAAGCATCCAGTATCTCTCCTTCATCAGGAGCTCGTAGAATTTCCAGCAAAGCCATTCAACTGCATGGCAGGAAGCGTATTCGCAAGAAGCCACAGCTCCTGTCCATCACTTCAACTGGGATCAAATAATTCCCTGAGCATGTTGGAAGAGAACGAGCACCAACCAGGCGGATCAGTCCACATGTCAGCCACGGCATTGTTGCAGAAAGCAGCTCAAATGGGAGCAACTATAAGTAACGGTGCTAACAGCTCTTGCATGGCACCCTCGTCATTTGGGAATAATAATGACCACCACCTGAGCAGTGGACAATCTTTTAATATTCCATCATCTCAGTATTTCAGCGGAAATAATAGCTTTGGGATGAACAGTGTGGATATGTTCAATGCTATATTGGACCAAAGCAAGGCGCTATCGGAGATGATAGAGCAGAATAGTCGAAGCAGTAATAACATGAACAACAACGGAGTTTTGCATGGTGCCAGTAAAGGAGGTGGAGATGTGTTGACTCTGGACTTGTTGGGGATGGGAGGAGGGGGACGCGGTGCGCACGATGCCTTTCTATGGCGCCAAGCAGGCTGA 1407 0.4762 MSNITSRDSGSFSPENTREDAVIKQHPHRHHFHSSGSLTSTTTNSNGSNANSQLPPPPPPPKKKRSLPGNPDPSAEVIALSPNTLMARNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRPTTEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANNEGLLGPKLLGPNSNSQGQHQIPSLVSSMPINTNFNPQNGTPHFDHPDEIKHPVSLLHQELVEFPAKPFNCMAGSVFARSHSSCPSLQLGSNNSLSMLEENEHQPGGSVHMSATALLQKAAQMGATISNGANSSCMAPSSFGNNNDHHLSSGQSFNIPSSQYFSGNNSFGMNSVDMFNAILDQSKALSEMIEQNSRSSNNMNNNGVLHGASKGGGDVLTLDLLGMGGGGRGAHDAFLWRQAG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3767 468 MobiDBLite consensus disorder prediction 1 74 - -
Prci3g3767 468 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 44 451 IPR031140 -
Prci3g3767 468 MobiDBLite consensus disorder prediction 34 51 - -
Prci3g3767 468 FunFam protein indeterminate-domain 5, chloroplastic-like 145 224 - -
Prci3g3767 468 MobiDBLite consensus disorder prediction 52 67 - -
Prci3g3767 468 Gene3D Classic Zinc Finger 91 133 - -
Prci3g3767 468 SUPERFAMILY beta-beta-alpha zinc fingers 90 187 IPR036236 -
Prci3g3767 468 FunFam protein indeterminate-domain 12-like 70 138 - -
Prci3g3767 468 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 113 IPR013087 -
Prci3g3767 468 Gene3D Classic Zinc Finger 146 226 - -
Prci3g3767 468 Pfam Zinc finger, C2H2 type 91 113 IPR013087 -
Prci3g3767 468 SMART c2h2final6 132 162 IPR013087 -
Prci3g3767 468 SMART c2h2final6 91 113 IPR013087 -
Prci3g3767 468 SMART c2h2final6 167 187 IPR013087 -
Prci3g3767 468 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Prci3g3767 468 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3767 Prci-Chr3 46583004 46586162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3767 48 357 IDZ Gene Family AT3G50700 54.386 1.69e-110 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci3g3767 zf-C2H2 0.0046 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3767 - - pcin:129304381 880.167