Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3763 ATGGATCATGCCCGATCAACATCGGGGAATGCTGAGGATAATGTGGGGATTCCAGATGACTTGCGATGCAAGAGGTCAGATGGGAAACAGTGGAGATGCACTGCCATGTCTATGCCAGATAAAACAGTCTGTGAGAAGCACTATATCCAGGCAAAGAAAAGGGCAGCTAATTCTGCCATGAGAGCTAGTATGAAGAAGGCTAAGAGGAAGTCATTAGGTGAGAATGAAGTTTATCTAGAGAGCAAGAGTGAGGATTTTGACATGCCACTTGCTAGCATGAAAGTTGAACAGCATTCGGCCTCTGGAAAGAGCAAGGCATCAAAAAATCAGTCCCGATATACAGCAGAGACACCAACAACAAGGACCACCTCTGTGCGAAATGCTCCAAAGCCAAACGATGATTCACCAGATGATATTCCCCAGTATGAAGAAAATTGGATGTCATATGAGTCACCACCTGCTTCTCGAATGGACATGTCCAGGAAAAGATCTCAAACAAATTTAGATGTCAATGCAGCTACAGAATACTCAGATGGAAGTACAGATTCCTCTGATGACACTGGTGGGCAAACTTGTCATCAATGTCGAAGGAGTGACAGAGACAGAGTTATTTGGTGTCTAAGATGTGATAGGAGAGGATACTGTGAGAGCTGTATATTAACATGGTACTCAGACATGTCATTGGATGAAATTCAGAGGACTTGTCCTGCCTGCCGTGGCACCTGTAATTGCAAAGTTTGCTTACGCGGTGATAATTCAATAAAGGTTCGGATTCGGGAGATACCTGTTCTAGACAAGTTACAGTATCTCCACTTGCTGCTGTCATCAGTACTTCCTGTGGTAAAGCAGATCCATCATGAGCAGTGTTATGAAGTTGAACTAGAAAAGAAGTTGCGTGGGATTGAAATGGATCTTCCTAGGATGAAACTGAATGCAGATGAGCAAATGTGCTGTAATTTCTGTCGGATACCCATTACTGATTATCACCGACATTGCCCAAATTGTACGTATGATTTATGCCTTAATTGCTGTCGAGATCTTCGAGAAGCAAATGTAAATCCAGAAAAGGTAACTCCAACAGATGAAGCAAAACTTTCAAATCAGAATTTGCTATATAAGTTTCCTGATTGGAGATCCAACAGTGATGGTAGTATCCCATGCCCCCCAAAGAAATATGGTGGCTGTGGTTATTCACCATTGAATTTAAGCCGCATCTTCAAGATGAATTGGGTTGCAAAATTGGTGAAAAATGTGGAGGAGATGGTTAGTGGCTGCCAGATTAGTGAAGTTGGAGAATCAGAAACCAAGTTGAATGCCAAGCTTTGCCAATCTTCTCACAGGGAGGCCAGTGATGATAACTATCTGTACTGTCCACCATCTGAAGATCTCAAAACTGATGGGATAGGAAATTTTAGAAAGCACTGGAAAAATGGTGAACCAATTATTGTTAAGCAAGTATTTGATATGTCATCAAGCTGGGATCCATTGGCCATATGGAGAGGGATTCGAGAGACAGCAGATGAGAAAATGAAAGAAGTTGAGAACAGAGTGGTTAAGGCCATGGATTGTTTAGCCTGGTCAGAGATAGATATCGAACTTAATGAATTTATGAAAGGATACTTTGAGGGCCGTACCCATGAAAATGGCTGGCCACAATTATTGAAGTTGAAAGATTGGCCTTCACCCAGTGCATCTGAAGAATTTTTGTTGCAACAAAGACCTGAATTTATCAGCAAACTGCCTTTACTTGAATATATTCACTCAAAATGGGGCCTTCTTAATGTTGCGGCTAAATTGCCTCATTACTCCTTGCAGAATGATGTAGGACCCAAGATTTATATATCCTATGGGATCAACGAGGAACTTGGTAGTGGTGACTCAGTGACCAATCTCCACTTCAATATGCGTGACATGGTCTACCTCTTGGTCCATACAAGTGAAGTGAAGCTGAAGAACTGGCAGGGAACAGAAAGTGAAAAGGTACAGACATCATCTGATGCAAGTGAATTTCCTGTGGATCCACAAGTGTGTTCAGTGGGCAGTCCAGTTGATTCATCACTTGGCACAGAAAGAAATGGATTGGACTTGGCTTCAAATGAGAAAACATCCATTATCGATGAAGGGTTTGAAAATTATTCTAGTGCTGAAGGGGATATGATCAATTCTGAACTTCCAGTCAGAGATGGAGATGCCTCGGGCAAAACAGCTCCTGGAGTTCTTTGGGATGTCTTTCGACGGCAGGATGTTCCAAAGCTGACTGAATATCTAAAAACACATTGGAAACAATTTGGGCGTCCAGATGATATAGTAAATAAATTTGTTACAAGGCCTCTTTATGATGGAGTTATTTGTCTTAACAAACACCATAAAGGGAAGTTGAAGGAAGAATTTGGGGTGGAGCCATGGTCATTTGAACAGTGTGTGGGGGAAGCTGTATTTGTTCCTGCAGGGTGCCCTTTCCAAGCAAGGAATATTCAGTCCACCGTTCAGCTTGGCCTTGATTTCTTATCACCGGAAAGCCTGGGGGAGGCTGTGAGATTGGCTGAGGATGTCCGCTGTCTGCCAAATGAACATGAAGTCAAGCTTCAAGTATTGGAGGTTGGGAAGATATCTCTTTATGCAGCAAGTTCAGCCATCAAAGAAGTTCAGAAACTCGTTCTTGACCCAAAACTTGGTGCAGAGATTGGATTTGGGGATCCCAATCTGACTGCAATGGTTGCTGAGAACTACGAGAAGATGGTTAAGCGAAGACAGATTTCTTGTGCCTGA 2769 0.4258 MDHARSTSGNAEDNVGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRASMKKAKRKSLGENEVYLESKSEDFDMPLASMKVEQHSASGKSKASKNQSRYTAETPTTRTTSVRNAPKPNDDSPDDIPQYEENWMSYESPPASRMDMSRKRSQTNLDVNAATEYSDGSTDSSDDTGGQTCHQCRRSDRDRVIWCLRCDRRGYCESCILTWYSDMSLDEIQRTCPACRGTCNCKVCLRGDNSIKVRIREIPVLDKLQYLHLLLSSVLPVVKQIHHEQCYEVELEKKLRGIEMDLPRMKLNADEQMCCNFCRIPITDYHRHCPNCTYDLCLNCCRDLREANVNPEKVTPTDEAKLSNQNLLYKFPDWRSNSDGSIPCPPKKYGGCGYSPLNLSRIFKMNWVAKLVKNVEEMVSGCQISEVGESETKLNAKLCQSSHREASDDNYLYCPPSEDLKTDGIGNFRKHWKNGEPIIVKQVFDMSSSWDPLAIWRGIRETADEKMKEVENRVVKAMDCLAWSEIDIELNEFMKGYFEGRTHENGWPQLLKLKDWPSPSASEEFLLQQRPEFISKLPLLEYIHSKWGLLNVAAKLPHYSLQNDVGPKIYISYGINEELGSGDSVTNLHFNMRDMVYLLVHTSEVKLKNWQGTESEKVQTSSDASEFPVDPQVCSVGSPVDSSLGTERNGLDLASNEKTSIIDEGFENYSSAEGDMINSELPVRDGDASGKTAPGVLWDVFRRQDVPKLTEYLKTHWKQFGRPDDIVNKFVTRPLYDGVICLNKHHKGKLKEEFGVEPWSFEQCVGEAVFVPAGCPFQARNIQSTVQLGLDFLSPESLGEAVRLAEDVRCLPNEHEVKLQVLEVGKISLYAASSAIKEVQKLVLDPKLGAEIGFGDPNLTAMVAENYEKMVKRRQISCA 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3763 922 SUPERFAMILY Clavaminate synthase-like 472 859 - -
Prci3g3763 922 Pfam JmjC domain, hydroxylase 781 831 IPR003347 -
Prci3g3763 922 MobiDBLite consensus disorder prediction 94 143 - -
Prci3g3763 922 ProSiteProfiles Zinc finger RING-type profile. 192 239 IPR001841 -
Prci3g3763 922 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 886 IPR045109 GO:0032454|GO:0033169
Prci3g3763 922 MobiDBLite consensus disorder prediction 97 130 - -
Prci3g3763 922 MobiDBLite consensus disorder prediction 56 76 - -
Prci3g3763 922 Pfam WRC 18 58 IPR014977 -
Prci3g3763 922 ProSiteProfiles WRC domain profile. 17 61 IPR014977 -
Prci3g3763 922 MobiDBLite consensus disorder prediction 1 23 - -
Prci3g3763 922 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 185 252 IPR018866 -
Prci3g3763 922 Gene3D Cupin 454 861 - -
Prci3g3763 922 SMART cupin_9 569 852 IPR003347 -
Prci3g3763 922 ProSiteProfiles JmjC domain profile. 588 852 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3763 Prci-Chr3 46574036 46581498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3763 18 76 GRF Transcription Factor Family AT3G13960 38.983 2.43e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Prci3g3763 JmjC 2.3e-05 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3763 K15601 - gmx:100792166 1359.36