Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3749 ATGGGTTCTGCTTCTAAGGCGCTAAGCTCCATTTTCATCCTCCTCCTCTTGATGCTCCTATCTTTTCAAAGAACTCGCATTTTGTCTTTGGATACTCTGTTCCACCCAGCAGGAAACTTCCACATCCACGTCCTGTCTGAGAATGGACAAGAAAATGACAACCAGATCAAGAAAGTCTCTGGACAAGATGAGAATGATGAGAAGGGGCCCCTGATAATGGAAAAGTTCAGAGTTTTGCTCGGACTCAACAGTGTCCACGCCAGAAGGCCGTCCAATGGCGATTCTGGCTTTCTCTCTCCATCGCCTTCTCCTTCGCCTAACATTGATCTCGAGGCTCCATCTCCATCTCCATCGCCTTCTCCATCTAATCTTCCGTTACCGCACGTATATGCTCATCCCTTTCCTCCACGACATCGTTCCCATTTTAATCCGCCCGCTCACAAGTTGCAACATAAAGATAGAGGCAGAATTCAGGCAATACTAGTAGGTGCTCTTGTGTCTGCAGGGGTTGCTACAGTGATTTGCGCTCTCGGGCTTATCTGGTTTTTCAGAAAATGCAGAAAGCATGCAAGGAAACCCAAAAGGACAATGCCGCTCTGTAGCAAGAACGGTGGAAGCGGAGGTACTTATGAAAACTCGTCCAGTCAGGTGGGTCTGAACACTGCCCTAGATCCGTTTTACCTGAATTCTTTGGGCGAGGATGTAGAGCGACACACTTGCAGCTTGAAACAAACTTGCGAAACAGTAAATACAAGCTCAGATCATAGCTCCATCCCAAAATGTGCAATTTACGAGAAGATGGAATTAAATCAAGAAATGATTAGCTCAGGATATGATAATGCCAGCAGTTCTTCCACAAAGGAAATTCTATCTGTTCAGGAGGACGCCGAATCGGGGAAACATGAACCCGAATCTGATGATGGTGGAGATAAAATTGTTACCATGGAACGCCATTCATCAGAGACTGAAAGTTTTCATTCCTTCGCCGATTCCCACTCGTCGAATGTTAGACTTTCCGATGCTTCAGCGGGCAGTGTGACTGAGACAGTGTCTCCGTCGCCTCGAGCAACTCAGTCTAATCCTATCAGTTCGCCAATTCCATTGACAAAGGAAATTCCTCATTCGCGCCAAACTTCAACTTCGAAGTTAGAATCTCCTCCATCACCGTGCATTACAAAGCAGGAAGAGCAAAAGATTGAAGTTTGTTCACAGTGTCCACAAGCCTCCACGCCACCCCCGCCGCCGCCACCCCCGACTCTACACGTGTCCTTGTTTTCTTTGCATTCTCTCACTTCTTCGTCTAGAATTCCCTACGGCTCTCCACGTTCATCTTCAAAGAACTCGGATTCTGACTCAGCACTGAATCGAAGTGGAGAAAATGAGTCGCCTTCTGCTCCTCAATCTCACCCTGCAAGATCCCCACCTACCATTCCTCCACCACCGCCCTTCAAAGGCAATAACAACAATGTGAAAACTCCACCTCCTCCGCCGTCCCAGCTTCCCCAGTTTACACCTCTGGGAAAAGATGGAGCCCCCTTACCGAAACTCAAACCACTTCACTGGGACAAAGTTAGAGCTGCCCCAGATCGCACAATGGTTTGGGACAAGCTGCGATCAAGCTCGTTTGAGTTTGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTGCACAATTCAATGAAGAACGATGAGACAAAAAGCAAAACCCCTTCTCCAAGCAAACATCTTCTCGAGCCAAAGAGGCTGCAGAACATAACAATTCTCTCAAAAGCTCTCAATGTGACGGCTGAACAAGTATGTGAAACTCTAATACAAGGTAAGGGCCTCACTTTACAACAACTAGAGGCACTGGTCAAGATGGTACCCACTAAGGAAGAAGAGGATAAGCTCTCGAATTATAAAGGAGAGGTCAATGATTTGGGATCCGCGGAAAAGTTTGTGAGAGCAATGCTGAGCATACCCTTTGCCTTTCAACGTGTTGAAGCCATGCTTTACAGAGAAACCTTTGAGGACGAGATTGTCCACCTCAGGAACTCTTTTTCAATGCTTGAGGAGGCGTGCAAGGAACTAAGATCAAGTAGGCTCTTCTTGAAATTGCTTGAAGCTGTGCTGAAAACAGGAAACCGTATGAACGTTGGGACAATAAGGGGAGGTGCCCGAGCATTCAAGCTCGATGCCCTTCTCAAGCTAGCTGATGTCAAGGGAACTGATGGGAAAACCACGTTACTCCATTTTGTTGTTCAGGAGATTGTTCGATCAGAAGGAATCAGAGTTTCGGATAGCATCATGGGGAAAATCAGCCAGAAAAATAAGAACAGGACAGAAGAAGAGAAGGAAGATGATTACAGAAGAATGGGATTGGAACTTGTTTCTGGCCTGAGTACCGAGTTATACAACGTAAAGAAGACAGCAACAATCGACTTGGACGTTCTTGCTAGGTCTGCCTCGAACCTCAAAGACGGAATGGCTAAGTTGCAATATCTGGTACAAGAGTTACAGACGGATGAAAAGAGTGAGAACTTTGTGAATTCGATGAAGGCTTTTCTAAATTATGCGGAGAGAAATCTGAGGGTCCTGCAAGGCGATGAAGATAGAGTGCTAGCTCGTGTGAAGGAAATCACGGAGTATTTTCATGGGGATGTGAGCAAAGAAGACGCAAGCCCACTTCGGATATTTGTGATTGTAAGAGACTTTATGGGCATGTTGGATAATGTATGTAAAGAACTGAGAAGGTCCCAAGCACCCCGCACCCCAAATCCCCTGGCTCCATTCAGGTAG 2781 0.4635 MGSASKALSSIFILLLLMLLSFQRTRILSLDTLFHPAGNFHIHVLSENGQENDNQIKKVSGQDENDEKGPLIMEKFRVLLGLNSVHARRPSNGDSGFLSPSPSPSPNIDLEAPSPSPSPSPSNLPLPHVYAHPFPPRHRSHFNPPAHKLQHKDRGRIQAILVGALVSAGVATVICALGLIWFFRKCRKHARKPKRTMPLCSKNGGSGGTYENSSSQVGLNTALDPFYLNSLGEDVERHTCSLKQTCETVNTSSDHSSIPKCAIYEKMELNQEMISSGYDNASSSSTKEILSVQEDAESGKHEPESDDGGDKIVTMERHSSETESFHSFADSHSSNVRLSDASAGSVTETVSPSPRATQSNPISSPIPLTKEIPHSRQTSTSKLESPPSPCITKQEEQKIEVCSQCPQASTPPPPPPPPTLHVSLFSLHSLTSSSRIPYGSPRSSSKNSDSDSALNRSGENESPSAPQSHPARSPPTIPPPPPFKGNNNNVKTPPPPPSQLPQFTPLGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKLRSSSFEFDEEMIESLFGYNLHNSMKNDETKSKTPSPSKHLLEPKRLQNITILSKALNVTAEQVCETLIQGKGLTLQQLEALVKMVPTKEEEDKLSNYKGEVNDLGSAEKFVRAMLSIPFAFQRVEAMLYRETFEDEIVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKNKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLARSASNLKDGMAKLQYLVQELQTDEKSENFVNSMKAFLNYAERNLRVLQGDEDRVLARVKEITEYFHGDVSKEDASPLRIFVIVRDFMGMLDNVCKELRRSQAPRTPNPLAPFR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3749 926 MobiDBLite consensus disorder prediction 468 502 - -
Prci3g3749 926 ProSiteProfiles Formin homology-2 (FH2) domain profile. 506 926 IPR015425 -
Prci3g3749 926 MobiDBLite consensus disorder prediction 407 421 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 195 215 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 106 132 - -
Prci3g3749 926 SUPERFAMILY Formin homology 2 domain (FH2 domain) 519 914 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 91 150 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 424 467 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 91 105 - -
Prci3g3749 926 Gene3D Formin, FH2 domain 530 918 IPR042201 -
Prci3g3749 926 MobiDBLite consensus disorder prediction 293 325 - -
Prci3g3749 926 Pfam Formin Homology 2 Domain 510 903 IPR015425 -
Prci3g3749 926 SMART it6_source 506 918 IPR015425 -
Prci3g3749 926 MobiDBLite consensus disorder prediction 277 516 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 277 292 - -
Prci3g3749 926 MobiDBLite consensus disorder prediction 326 406 - -
Prci3g3749 926 PANTHER FORMIN-RELATED 20 918 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3749 Prci-Chr3 46529018 46533126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3749 491 926 FH2 protein (formin) Gene Family AT3G05470 74.773 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3749 - - qsu:112030660 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3749 3 46529018 46533126 Prci3g3749 3 46529018 46533126 CCT
Prci3g3749 3 46529018 46533126 Prci3g3749 3 46529018 46533126 ECH