Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3732 ATGTCCGGGGATGGACAGAACAAAAGGAGAATAGCCATCATCGGCATCTCTTCCATCTTACTGGTGGGCATGGTGGTGGCCGTGACGGTTGGCGTGACGTGGAAGCAGACAGATTCTGACGAGGAAGACAAGGCTTCAGACAAGACCGTGTCTAACAAAGTAAAAGCAGTGCAGAGCCTGTGCGCCCCCACCGACTATAAGAGAGAATGTGAAGAGAGCCTAGAGGCTGAGGCTGGCAACTCCACGGACCCCAAAGACCTCATCATGAAGGCCTTCAACGTCACCATCAAGAAGATTGAGAAGAGCCTCCGAGAGTCCGATACCTTGCACGAGGCAGAGAAGGATCCCCGGGCCCAAGAGGCCCTCCAGACCTGCAAGCATCTCATGGAACTTTCCATCGGCGAGTTTAAGAAATCGCTCAACACCTTTGAGACCTTTGATTTCTACAACCTGGACAAGATTCTCATGAACCTCAAAGTGTGGCTGAGCGGGGCTATCACTTACCAAGAAACATGCATAGAAGGGTTCGAGGATGCCAAGAGCAACGCCGGTCAGAAGATGAAGCAGGCACTCACTGCCTCCATGCACATGAGCAGCAATGGCCTCGCCATCGTCAACGACATGGCCGAAGCTTTGTCCAATCTGCACATCACAAAACAAGGAAGGCGTCTGCTTAATGATCAGGAGGATGGTAACGAAGATCATCACGGCGAGGTGGGTGCAAACGAGGACGGCGCGAGACCCGATGGTGACTTCGAGTTCCCCGTGTGGGTTGATGAAAATCCTGCTGCCCGGAGACTACTGACGAGCGACCATAAAAGCAAGCTGAAGCCCGACGTGGTAGTAGCTCAAGACGGGAGTGGGAAATACAAGAAAATCAAAGATGCGTTGAAGCACGTGCCGAAGAAGAACAAGAAGCCGTTCGTGATCTACATCAAGGAAGGGGTGTACAAAGAGTACGTGGAGGTGGAGAAGGACATGACGTACGTGGTGTTCGTGGGGGATGGTGGCAACAAGACCCGCATCACCGGCAATAAGAACTTCGCTGATGGCATCGGCACCTACAACACCTGCACGGTGTCGATAGAAGGGGACCACTTCATCGCCATCAACATGGGGTTCGAGAACTCGGCCGGTCCTGACGGACACCAGGCGGTGGCATTGAGGGTTCAAGCCGACTTTTCCATATTCTACAGGTGCCAATTGGATGGGTACCAGGACACGCTGTATGCTCACACCATGCGTCAATTCTATAGGGACTGCGTTATCACCGGCACCATAGACTTCATCTTCGGGGACGCCGCCGTTGTGATGCAAAATTGCACGTTCGTGGTGAGAAAGCCAAATGAGAACCAGCAATGCATAGTGACGGCGCAAGGGAGGAAGGAGAGGCATCAACCGTCAGCGCTGGTGATCCAGGGAGGGTCCATAGTGTCGGACCCCAAGTTCTATAAAGTGAGGTTTGAGAACAAGGCGTACTTAGCACGCCCATGGAAGAACTTCTCAAGGACCATCATAATGGAAACCTTCATAGATGACTTGATTGATCCGGAAGGGTTTCTCAAGTGGGACGCTAACTCCACATCCTACAAGACATGCTGGTATGGCGAGTTCAATAACACGGGGCCTGGTGCCAAAAAAAGCCATCGAGTCAAGTGGAACGGCATCAAGAATCTCACGGCACAACATGCTCTAGATTTCACACCCTTAAGGTACTTCAAGTCTGATTACTGGATCAGGGAAACCAGGATTCCTTACAATCCCACCACAATGTCCTCCCCTCCATTTAGTCCTCAGAAGATCTCCTCTCAATGA 1815 0.519 MSGDGQNKRRIAIIGISSILLVGMVVAVTVGVTWKQTDSDEEDKASDKTVSNKVKAVQSLCAPTDYKRECEESLEAEAGNSTDPKDLIMKAFNVTIKKIEKSLRESDTLHEAEKDPRAQEALQTCKHLMELSIGEFKKSLNTFETFDFYNLDKILMNLKVWLSGAITYQETCIEGFEDAKSNAGQKMKQALTASMHMSSNGLAIVNDMAEALSNLHITKQGRRLLNDQEDGNEDHHGEVGANEDGARPDGDFEFPVWVDENPAARRLLTSDHKSKLKPDVVVAQDGSGKYKKIKDALKHVPKKNKKPFVIYIKEGVYKEYVEVEKDMTYVVFVGDGGNKTRITGNKNFADGIGTYNTCTVSIEGDHFIAINMGFENSAGPDGHQAVALRVQADFSIFYRCQLDGYQDTLYAHTMRQFYRDCVITGTIDFIFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVSDPKFYKVRFENKAYLARPWKNFSRTIIMETFIDDLIDPEGFLKWDANSTSYKTCWYGEFNNTGPGAKKSHRVKWNGIKNLTAQHALDFTPLRYFKSDYWIRETRIPYNPTTMSSPPFSPQKISSQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3732 604 NCBIfam pectinesterase inhibitor domain 50 207 IPR006501 GO:0004857
Prci3g3732 604 PANTHER PECTINESTERASE 18 580 - -
Prci3g3732 604 CDD PMEI-like_3 59 209 - -
Prci3g3732 604 SUPERFAMILY Pectin lyase-like 277 587 IPR011050 -
Prci3g3732 604 SMART PMEI_2 52 204 IPR006501 GO:0004857
Prci3g3732 604 Pfam Pectinesterase 279 575 IPR000070 GO:0030599|GO:0042545
Prci3g3732 604 MobiDBLite consensus disorder prediction 227 252 - -
Prci3g3732 604 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Prci3g3732 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Prci3g3732 604 ProSitePatterns Pectinesterase signature 1. 304 323 IPR018040 -
Prci3g3732 604 FunFam Pectinesterase 53 209 - -
Prci3g3732 604 Gene3D - 273 590 IPR012334 -
Prci3g3732 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 209 IPR035513 -
Prci3g3732 604 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Prci3g3732 604 FunFam Pectinesterase 273 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3732 Prci-Chr3 46394970 46397212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3732 4 595 Carbohydrate Esterase AT3G05610 47.475 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3732 K01051 - gmx:100803527 687.182