Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3731 ATGGCCCAGCCCCTTCATTATTTCCTTTTCATTCTCATCCTTTTACCTTCCCTCATGAAAATTGATGCTTTCTTAGACGAAATCCCCTCAGACACCAGAAACCAGCTAGACTTGCATGCCATGATTGCCCAGGTCTGCATGGACGTTGAAGACCACAACACGTGCCTCGCCAATATCCAAAACGACATTGTCAAGCATGGGCCTCCAACCCCGTCTTCAGTTGTAACTGCCGCACTCCGAGCCACTCTCAACGAAGCCATGGGTGCCATTGACAAGATCTCCAAGTTCAGCACTTTCTCCATCAGCTACCGCGAGCAAGTAGCCATCGAAGATTGCAAGGAACTCCTTGATTTCTCTGTGTCGGAGCTGGCCTGGTCGCTAGGCGAGATGAGGAGAATTCATGTAGGCGATAAAACCGTTGACTATGATGCCGACCTTCAAGCCTGGCTGAGTGCAGCGCTCGGCAACCAAGACACCTGTCTCGAGGGCTTCGAAGGCACCGACAGGCGTCTTCAGGGTTACATCAGTGGAAGCTTGACACAAGTCACGCAGCTAATAAGTAACGTTTTGGCTCTGTACACCCAATTGCATAGCTTACCCTTCAGGCCTCCGGCTAATAAAACTAGGCTGGCGAGTGATCAGAGCTCGGAGCAATTTCCAAAGTGGATGACAGAGGGTGATCAAGAGTTGCTGAAATCTAGGCCACAAGGGGTGCATGCCGACGCTGTGGTGGCGCTGGATGGGAGCGGCCATTACCGTTCCATTGCAGAAGCTGTTGATGCGGCTCCAAGCCAGAGCAACCGGAGGTATATTATTTACGTGAAAAAGGGCATTTATAAAGAGAACGTGGATATGAAGAGGAAGAAGACCAACATCATGTTCGTAGGAGAAGGCATCGGCAAGACCATCGTCACAGGAAACCGCAATTTCATGCAAGGATGGACCACCTTTCGAACTGCCACCGTTGCTGTATCGGGGAAGGGATTTATAGCAAGGGACATGACATTTCGAAACACGGCAGGGCCAGAAAATCATCAGGCAGTGGCTCTGCGGGTGGACTCGGACCAATCAGCGTTCTACAGGTGTAGTATAGAAGGTCACCAAGACACGTTGTATGCGCACTCCCTCAGGCAATTCTATCGTGAGTGCGAAATCTATGGCACCATAGACTTCATATTCGGCAACGGAGCCGCGGTGCTGCAAAACTGCAAGTTATACACAAGAGTGCCAATCCCATTGCAGAAGGTCACGATAACGGCTCAGGGCAGAAAAAGCCCACACCAAAGCACTGGGTTCATAATACAAGACAGCTTCATTCTCGCCACTCAACCCACCTATTTAGGTAGGCCGTGGAAGCAGTACTCCAGGACGGTGTACATGAACACGTACATGAGTGGGCTCGTGCAACCTAGAGGGTGGCTCGAGTGGGCTGGCAACTTTGCCCTCGGCACCCTGTGGTACGGGGAGTATAAGAACTATGGACCTGGTTCGTCGCTTGCCAGAAGGGCCAACTGGCCTGGTTTTCACATTATTAAAGATGCCGCCACCGCCAACTATTTCACCGTTCAGCACTTCCTTCATGGCGATTCATGGTTGCCCGCCACGGGTATTAGGTTCACCGCTGGCTTGACCAATTAA 1638 0.5128 MAQPLHYFLFILILLPSLMKIDAFLDEIPSDTRNQLDLHAMIAQVCMDVEDHNTCLANIQNDIVKHGPPTPSSVVTAALRATLNEAMGAIDKISKFSTFSISYREQVAIEDCKELLDFSVSELAWSLGEMRRIHVGDKTVDYDADLQAWLSAALGNQDTCLEGFEGTDRRLQGYISGSLTQVTQLISNVLALYTQLHSLPFRPPANKTRLASDQSSEQFPKWMTEGDQELLKSRPQGVHADAVVALDGSGHYRSIAEAVDAAPSQSNRRYIIYVKKGIYKENVDMKRKKTNIMFVGEGIGKTIVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAGPENHQAVALRVDSDQSAFYRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKLYTRVPIPLQKVTITAQGRKSPHQSTGFIIQDSFILATQPTYLGRPWKQYSRTVYMNTYMSGLVQPRGWLEWAGNFALGTLWYGEYKNYGPGSSLARRANWPGFHIIKDAATANYFTVQHFLHGDSWLPATGIRFTAGLTN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3731 545 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Prci3g3731 545 PANTHER PECTINESTERASE 19 533 - -
Prci3g3731 545 Gene3D - 236 543 IPR012334 -
Prci3g3731 545 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Prci3g3731 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 197 IPR035513 -
Prci3g3731 545 NCBIfam pectinesterase inhibitor domain 40 197 IPR006501 GO:0004857
Prci3g3731 545 CDD PMEI-like_4 67 196 - -
Prci3g3731 545 Pfam Pectinesterase 241 529 IPR000070 GO:0030599|GO:0042545
Prci3g3731 545 FunFam Pectinesterase 39 198 - -
Prci3g3731 545 Pfam Plant invertase/pectin methylesterase inhibitor 41 192 IPR006501 GO:0004857
Prci3g3731 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 197 IPR035513 -
Prci3g3731 545 SUPERFAMILY Pectin lyase-like 237 542 IPR011050 -
Prci3g3731 545 FunFam Pectinesterase 235 543 - -
Prci3g3731 545 SMART PMEI_2 37 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3731 Prci-Chr3 46390298 46393529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3731 37 545 Carbohydrate Esterase AT3G05620 63.077 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3731 K01051 - gmx:100810565 876.7