Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3723 ATGGCGACGAGAAATCGTACGTTGCTCTATAGGAAGTACAGAGATGCATTGAAGAGTGTTCGGGTTCCGTCGAGTTCTACGGCCTTGACGAGTTCCGGCGGTGCTGGTGGTCCAGTGATTGAATTGGTCAGTACGTCGCTTCTGAATCAGAATCGTCCTTATGCTCCGATTAGTACCGAGGATCCTGGTTATTCAAGTAAGGGTCCACTTACTGTAGGACTACCTCCAGCTTGGGTGGATGTATCTGAAGAAATATCAGCCAACGTGCAACGAGCACGCACAAAAATGGCAGAGTTGACCAAAGCTCATGCAAAGGCTTTAATGCCGTCATTTGGAGATGGTAAGGAGGAACAACGAGCCATTGAAGCTCTAACTCACGAGATAACTGACTTGATAAAGAGATCAGAGAGACGACTGCAGAGACTTTCTTCTACCGGGCCTTCAGAGGATTCCAATGTGAGGAAGAACGTGCAGCGTTCTCTAGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGACAGCAAAAGGAGGGTCAAGATGGGATGGATCTAGAGATGAACATAAATGGAAGTAAATCCAGATTTGAAGATGATGCTTTGGACAATATGGTATTTAACGAGCATCAGATGGCCAAGCTGAAAAAAAGTGAGGCATTCACGGTAGAAAGAGAAAAGGAGATCCAACAGGTTGTGGAATCAGTAAACGAGCTTGGTCAAATTATGAAAGATTTGTCTGTGCTAGTTATAGATCAGGGAACGATTGTTGATAGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGATGATGGCCTTAAACAGCTGCAGAAGGCGGAGAGAACACAAAAGAAAGGGGGCATGGTGATGTGCGCAACGGTGCTTATTATCATGTGCTTTATTATGCTGGTTCTCTTAATCCTCAAGGAAATATTTTTGTGA 975 0.4421 MATRNRTLLYRKYRDALKSVRVPSSSTALTSSGGAGGPVIELVSTSLLNQNRPYAPISTEDPGYSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELTKAHAKALMPSFGDGKEEQRAIEALTHEITDLIKRSERRLQRLSSTGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEGQDGMDLEMNINGSKSRFEDDALDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELGQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVDDGLKQLQKAERTQKKGGMVMCATVLIIMCFIMLVLLILKEIFL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3723 324 Gene3D - 75 282 - -
Prci3g3723 324 PANTHER SYNTAXIN 81 310 IPR045242 -
Prci3g3723 324 ProSitePatterns Syntaxin / epimorphin family signature. 234 273 IPR006012 GO:0005484|GO:0006886|GO:0016020
Prci3g3723 324 Coils Coil 82 102 - -
Prci3g3723 324 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 228 290 IPR000727 -
Prci3g3723 324 Pfam SNARE domain 264 316 IPR000727 -
Prci3g3723 324 SMART tSNARE_6 223 290 IPR000727 -
Prci3g3723 324 CDD SNARE_syntaxin16 233 289 - -
Prci3g3723 324 SUPERFAMILY t-snare proteins 74 283 IPR010989 GO:0016020|GO:0016192
Prci3g3723 324 FunFam Syntaxin-43 75 282 - -
Prci3g3723 324 SMART SynN_4 69 184 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3723 Prci-Chr3 46341967 46345959 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3723 1 324 SNARE and Associated Proteins AT5G26980 77.846 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3723 K08489 - gmx:100796741 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3723 3 46341967 46345959 Prci3g3723 3 46341967 46345959 ECH
Prci1g4083 1 55906207 55911540 Prci3g3723 3 46341967 46345959 ECH