Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3721 ATGGTAATGATGGATCTCAATGTAAAGGAATCGTCATCGGATGAATCGGGTGACATTAATAAGTGCTGTAGTGATTGCAAAACCACTAAAACCCCACTCTGGAGAGGAGGGCCAGCGGGGCCCAAGACGCTATGCAACGCTTGCGGGATTAGATACAGGAAGAGAAGGGCTTCTTCGGTGAGATTGAACAAAGGACTACATAGGAAGAGAGAGAGAGCTCATAATTCAAGCGGCGGCGCTGCTGATGCCGTCACCGTCACCGTCATCTCGACGGATGACAATCATTTGAGGGAATCGTTGGAAATGAACGCGATAGGATTGGATGAGGAGGTTTTGTTGCAGAGCGTGCCGGCGGTTCTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGTTTGGGGAAGTGGAGGAAGCTGCTTTCTGTTTGATGGCATTATCCGGTGGCTTTGTTTTCGCTTAG 456 0.4912 MVMMDLNVKESSSDESGDINKCCSDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASSVRLNKGLHRKRERAHNSSGGAADAVTVTVISTDDNHLRESLEMNAIGLDEEVLLQSVPAVLKKQRCQRKRKFGEVEEAAFCLMALSGGFVFA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3721 151 SMART GATA_3 17 67 IPR000679 GO:0006355|GO:0043565
Prci3g3721 151 ProSiteProfiles GATA-type zinc finger domain profile. 23 53 IPR000679 GO:0006355|GO:0043565
Prci3g3721 151 ProSitePatterns GATA-type zinc finger domain. 23 48 IPR000679 GO:0006355|GO:0043565
Prci3g3721 151 CDD ZnF_GATA 23 70 IPR000679 GO:0006355|GO:0043565
Prci3g3721 151 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 16 56 - -
Prci3g3721 151 Gene3D - 19 79 IPR013088 GO:0006355|GO:0008270
Prci3g3721 151 Pfam GATA zinc finger 23 56 IPR000679 GO:0006355|GO:0043565
Prci3g3721 151 PANTHER OS01G0976800 PROTEIN 9 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3721 Prci-Chr3 46323260 46325037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3721 10 151 C2C2-Gata Transcription Factor Family AT5G49300 39.860 8.41e-25 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci3g3721 GATA 2.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3721 - - pcin:129306793 306.99