Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3718 ATGGATCCGGAGGGAGGATCCAACGATGGATCCAGCTACTACTCCATCCTCGGCATTCCTAGGGACGCCTCCTTCTCCGATGTTCGCACCGCTTATAGGAATCTCGCTCTGAAGTGGCACCCGGACAAATGGGCCGGAAACACTGCAATAATTGGAGAAGCCAAACGGCGATTCCAGCAAATTCAAGAAGCTTACTCAGTTCTTTCCGATCAATCTAAAAGGTCAATGTACGATGCCGGGTTCTACGATCCTTTAGTAGAAGAAGAAGACGAAGAATTCTGCGATTTCATGAACGAAATGATCTCGATGATGAACAATGTGAAGGACGAGGGGAACAGTTTGGAAGATCTGCAGAGGATGTTCGTAGAAATGGTTGGTGGAGATGAGATGAGCTTCGAGTCGAGGAATGATCAAACGAGTGGCAAGAGAGGACGTGTCAGTACACCAACAGGCAACGCGGCTAAGCGCAGCAACTCTCGCCGCTAG 486 0.4938 MDPEGGSNDGSSYYSILGIPRDASFSDVRTAYRNLALKWHPDKWAGNTAIIGEAKRRFQQIQEAYSVLSDQSKRSMYDAGFYDPLVEEEDEEFCDFMNEMISMMNNVKDEGNSLEDLQRMFVEMVGGDEMSFESRNDQTSGKRGRVSTPTGNAAKRSNSRR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3718 161 CDD DnaJ 13 70 IPR001623 -
Prci3g3718 161 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Prci3g3718 161 Gene3D DnaJ domain 3 102 IPR036869 -
Prci3g3718 161 SUPERFAMILY Chaperone J-domain 11 103 IPR036869 -
Prci3g3718 161 PRINTS DnaJ domain signature 32 47 IPR001623 -
Prci3g3718 161 PRINTS DnaJ domain signature 14 32 IPR001623 -
Prci3g3718 161 PRINTS DnaJ domain signature 53 73 IPR001623 -
Prci3g3718 161 PANTHER PUTATIVE, EXPRESSED-RELATED 8 140 - -
Prci3g3718 161 SMART dnaj_3 11 73 IPR001623 -
Prci3g3718 161 MobiDBLite consensus disorder prediction 141 161 - -
Prci3g3718 161 MobiDBLite consensus disorder prediction 128 161 - -
Prci3g3718 161 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Prci3g3718 161 Pfam DnaJ domain 13 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3718 Prci-Chr3 46306518 46308287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3718 13 79 C2H2 Transcription Factor Family AT1G74250 41.176 4.87e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3718 - - gmx:548049 248.054