Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3715 ATGGCATCATCGGCAAGACAGTCTTGCCAGGAGGAGGGTGATGACAGGAATCGTCGGGTTCCTGGTAAAGAGGGCTCCAAGCGAAGACAAGGGAGCTTAAAACAAGCAGACATACGTGCTATTAGGAATATTACGAAAGGACGGGGCGTGCATGACTTGGGATTGTACTTGGAACCTTTACTTCGAAAAGTGGTGTCTCGTTTCTTTTTCCTTCAAATTTCGTCGTGTCGATCGTGTGTATTCCTTATCCAGGTGCAAGAGGAGCTTCCACCTATACTTCAGCGGCACCGTCATCTATTTGCTTGCTGCGAAGAAACCCTTCATCCGACAGGAACATCGGGAGGCAGAGCTTTACGCTTGTGGTTTACTAACAGCTTGCCTGCAACAATTTTTACACGCACGAGGATAACCTCTAAGGAAGGCGCTCCGATTGGAATTGTTTTGCGTGATGCGAGATCTCAGAACTGCATAGTGAAGGAAGGTCCACTGTCCTGCACCAGAATAATGATGTGCGCGCTCAATGGTGAGTTTGGTTGTAACGGGAATGAGGATTGGAGTGAAGAGGAATTCAATGCCAATATCTCACCAGGAAGAGATAATAAGGGCGAGTTACTGAATGGAGAAAGGTTCGTTACATTGGAAAATGGAGTCGGTATTGTGCCGTACATTGAGTTCGGTGATAACTCCAGCTGGACCAGAAGCCGAAGGTTCAGGCTAGGAGCCAGAGCTGTAGAGAACGGAGCTAACATAAGAGAAGGCAGGAGTGAAGCTTTTATCGTCAAGGACAAACGTGGAGAGTCGTACAAGAAACACGACCGTCCATCACTGAATGACGAAGTATGGCGTTTGAAAAAGATAGCCAAAGATGGTCCAATTCACAAGCGGCTGTCGTTTTGTAAAGTAAAAACTGTTAGAGATCTGTTGCGGCTGAACGTGATCAACCCTTTTTCATTGCAAAAGATAATGGGAATTAGAAAGACGTTGTGGGACGCAATCATTGAGCATGCCAGGGCTTGCGAGATAGACGGTGAGCGTTACACTTTCCAGTGTATCACCACAGCACAACAACCAATAAGCCTTCTCTTCAATTCCATCTATGAGCTCGTGGGAGTGAGTTTTGGTGGGCCTCATTATCGTTCGTTAGATTCCCTGTACTCGGAAGAGAAGCGTGTCGTGGAAATAGCTAAGCGTAAGGCTTATGAGACAGTGGAGACATCAGTATATGGGTCGATGAAGGAATTAGCAGTGAGCTTGATTGTATGA 1263 0.4656 MASSARQSCQEEGDDRNRRVPGKEGSKRRQGSLKQADIRAIRNITKGRGVHDLGLYLEPLLRKVVSRFFFLQISSCRSCVFLIQVQEELPPILQRHRHLFACCEETLHPTGTSGGRALRLWFTNSLPATIFTRTRITSKEGAPIGIVLRDARSQNCIVKEGPLSCTRIMMCALNGEFGCNGNEDWSEEEFNANISPGRDNKGELLNGERFVTLENGVGIVPYIEFGDNSSWTRSRRFRLGARAVENGANIREGRSEAFIVKDKRGESYKKHDRPSLNDEVWRLKKIAKDGPIHKRLSFCKVKTVRDLLRLNVINPFSLQKIMGIRKTLWDAIIEHARACEIDGERYTFQCITTAQQPISLLFNSIYELVGVSFGGPHYRSLDSLYSEEKRVVEIAKRKAYETVETSVYGSMKELAVSLIV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3715 420 Pfam Calmodulin binding protein central domain 275 339 IPR046830 -
Prci3g3715 420 MobiDBLite consensus disorder prediction 9 34 - -
Prci3g3715 420 MobiDBLite consensus disorder prediction 1 34 - -
Prci3g3715 420 Pfam Calmodulin binding protein-like N-terminal domain 118 263 IPR046831 -
Prci3g3715 420 PANTHER OS02G0177800 PROTEIN 49 406 IPR012416 GO:0005516
Prci3g3715 420 Pfam Calmodulin binding protein C-terminal domain 354 404 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3715 Prci-Chr3 46294168 46296502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3715 110 402 Calmodulin-binding Proteins AT5G57580 41.558 4.55e-70 231