Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3714 ATGGCATCATCGGCAAGACAGTCTTGCCAGGAGGAGGGTGATGACAGGAATCGTCGGGTTCCTGGTAAAGAGGGCTCCAAGCGAAGACAAGGGAGCTTAAAACAAGCAGACATACGTGCTATTAGGAATATTACGAAAGGACGGGGCGTGCATGACTTGGGATTGTACTTGGAACCTTTACTTCGAAAAGTGGTGCAAGAGGAGCTTCCACCTATACTTCAGCGGCACCGTCATCTATTTGCTTGCTGCGAAGAAACCCTTCATCCGACAGGAACATCGGGAGGCAGAGCTTTACGCTTGTGGTTTACTAACAGCTTGCCTGCAACAATTTTTACACGCACGAGGATAACCTCTAAGGAAGGCGCTCCGATTGGAATTGTTTTGCGTGATGCGAGATCTCAGAACTGCATAGTGAAGGAAGGTCCACTGTCCTGCACCAGAATAATGATGTGCGCGCTCAATGGTGAGTTTGGTTGTAACGGGAATGAGGATTGGAGTGAAGAGGAATTCAATGCCAATATCTCACCAGGAAGAGATAATAAGGGCGAGTTACTGAATGGAGAAAGGTTCGTTACATTGGAAAATGGAGTCGGTATTGTGCCGTACATTGAGTTCGGTGATAACTCCAGCTGGACCAGAAGCCGAAGGTTCAGGCTAGGAGCCAGAGCTGTAGAGAACGGAGCTAACATAAGAGAAGGCAGGAGTGAAGCTTTTATCGTCAAGGACAAACGTGGAGAGTCGTACAAGAAACACGACCGTCCATCACTGAATGACGAAGTATGGCGTTTGAAAAAGATAGCCAAAGATGGTCCAATTCACAAGCGGCTGTCGTTTTGTAAAGTAAAAACTGTTAGAGATCTGTTGCGGCTGAACGTGATCAACCCTTTTTCATTGCAAAAGATAATGGGAATTAGAAAGACGTTGTGGGACGCAATCATTGAGCATGCCAGGGCTTGCGAGATAGACGGTGAGCGTTACACTTTCCAGTGTATCACCACAGCACAACAACCAATAAGCCTTCTCTTCAATTCCATCTATGAGCTCGTGGGAGTGAGTTTTGGTGGGCCTCATTATCGTTCGTTAGATTCCCTGTACTCGGAAGAGAAGCGTGTCGTGGAAATAGCTAAGCGTAAGGCTTATGAGACAGTGGAGACATCAGTATATGGGTCGATGAAGGAATTAGCAGGCCAGCCTTCCACGTCTACGTCGCTCGGTGAATTAATGCATACTGATGAACAAGTAGGCGGTGATCAAATGGAACCCAACAGTATTGGGAAAGAGTTTGTATCTGGAGAGTTGGTTGCTGGAGAAGATTGGAATTACCTGCCTAACGTGTCTGAGCTTGAATTACCAAACGGCCTGTCTCCTTCGTTGCTGTGGGGGATAGGAAATCCGCTTGGTTATTCTGATCAAGTTGAAGGACCCGAATCGAGTTATCAATATTTGCAGGATCATTCCGCTTTAACTTCTTGCAGAGGGAGAAGCAAAACTGTCTGGAATAAGATTCGGAATACTCTAAGATTGGTGATGCCCTTTCTGGGTAAGAGGAAGGGGAAACTTCCAGTTCCTTGTAACTAA 1578 0.4651 MASSARQSCQEEGDDRNRRVPGKEGSKRRQGSLKQADIRAIRNITKGRGVHDLGLYLEPLLRKVVQEELPPILQRHRHLFACCEETLHPTGTSGGRALRLWFTNSLPATIFTRTRITSKEGAPIGIVLRDARSQNCIVKEGPLSCTRIMMCALNGEFGCNGNEDWSEEEFNANISPGRDNKGELLNGERFVTLENGVGIVPYIEFGDNSSWTRSRRFRLGARAVENGANIREGRSEAFIVKDKRGESYKKHDRPSLNDEVWRLKKIAKDGPIHKRLSFCKVKTVRDLLRLNVINPFSLQKIMGIRKTLWDAIIEHARACEIDGERYTFQCITTAQQPISLLFNSIYELVGVSFGGPHYRSLDSLYSEEKRVVEIAKRKAYETVETSVYGSMKELAGQPSTSTSLGELMHTDEQVGGDQMEPNSIGKEFVSGELVAGEDWNYLPNVSELELPNGLSPSLLWGIGNPLGYSDQVEGPESSYQYLQDHSALTSCRGRSKTVWNKIRNTLRLVMPFLGKRKGKLPVPCN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3714 525 MobiDBLite consensus disorder prediction 9 34 - -
Prci3g3714 525 MobiDBLite consensus disorder prediction 1 34 - -
Prci3g3714 525 Pfam Calmodulin binding protein C-terminal domain 334 384 IPR046829 -
Prci3g3714 525 Pfam Calmodulin binding protein-like N-terminal domain 98 243 IPR046831 -
Prci3g3714 525 PANTHER OS02G0177800 PROTEIN 49 398 IPR012416 GO:0005516
Prci3g3714 525 Pfam Calmodulin binding protein central domain 255 319 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3714 Prci-Chr3 46294168 46296875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3714 57 381 Calmodulin-binding Proteins AT5G57580 41.108 9.09e-73 242