Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3688 ATGCCATCGGCGTTGTATCATTGTATCTTACTGTACTATTTTCATCTCTTCCTCCTATTTTTCTCTGCTGAATTTCGTCACTACCTGACCATGGATTTCCAGGGATTCTTAAGTGACTTGCAGGATTGGGAACTTTCTCGGAAGGACAAAGCGCGGAAAATGACGTCACAAGCGCTGCAAAAGGAAAAAGGTTCATCTTCTCAAAATACTGGATCAGTGGCTGTGGAGACAGCTTCAAGAGGAGAAACTTTTTCATTTGATTTTACAAAAAGTATTTCAGGACAATATGATTTCTCAAGAAATAAAGATTCTTTTGATCATGTCCATGGTAGTCATACAACTGAAGATGTTCCCGATGCTGCTTCGGAAAAAGAACTGGGTAATGAATACTTCAAGCAGAAGAAGTTTAAGGAAGCTGTTGACTGCTATTCAAGAAGTATTGCCTTCTCTCCGACAGCTGTGGCATATGCAAATAAAGCAATGGCCTATATCAAACTCAGAAGATTCCAACAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTAGATGATCGTTACATAAAAGCATACTCACGTCGAGCAACAGCTAGAAAAGAACTTGGGAAACTTAAAGAATCAATGGAGGATGCTGAATTTGCTTTGCGCTTGGAACCTGAAAATCAAGAAATCAAGAAACAGTATGCTGATATCAAATCTTTGTATGAGAATGAAATTCTTCAGAAAACATCTGGAGCTCTGAGAAGCTCTGTACAGGGAACTCAAAAAGTGGGAAAGTCAGAGACAAATATTGATAGGGGAACCATCCATACTGTTCCGAATGGTACTGAAAAATCTGGGGCTGCTGACGTTCTAGATCACACGAAGAGATATGATGGAATTAACAAGCAAGAAATGAAGGCATCTGTTCAACATCTTGCTTCACGTGTAGCTTCTCGGGTCATGGCTGAAGCTGCAAAAAATATAACACCGCCAAATTCAGCTTATCAGTTTGAGGTCTCATGGAGAGGGTTTTCAGGTGACCCTGCCCTGAAGGCTCGTCTTTTAAAGGCTATGTCTCCTCAAGACTTACCAAAGATATTCAAAAGTGCCTTGTCTTCTGCGATACTTATGGACATCATAAAGTGTGTGGCATCCTTTTTCACTGAAGACACGGTTCTGGCTGTCAGTTTCTTAGAGCACTTGACCAAGGTTTCAAGATTTGACATGCTCATTATGTGTCTTACATCAACAGATAAGCATGATCTGCGCAAGCTCTGGGATGATAGGTTCTGTAGCGAGGCAACTCCAATGGAGTATGCAGAGATTCTTGACAACCTCCGATCCAAATACTGCCTTGAACATTGA 1344 0.4115 MPSALYHCILLYYFHLFLLFFSAEFRHYLTMDFQGFLSDLQDWELSRKDKARKMTSQALQKEKGSSSQNTGSVAVETASRGETFSFDFTKSISGQYDFSRNKDSFDHVHGSHTTEDVPDAASEKELGNEYFKQKKFKEAVDCYSRSIAFSPTAVAYANKAMAYIKLRRFQQAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESMEDAEFALRLEPENQEIKKQYADIKSLYENEILQKTSGALRSSVQGTQKVGKSETNIDRGTIHTVPNGTEKSGAADVLDHTKRYDGINKQEMKASVQHLASRVASRVMAEAAKNITPPNSAYQFEVSWRGFSGDPALKARLLKAMSPQDLPKIFKSALSSAILMDIIKCVASFFTEDTVLAVSFLEHLTKVSRFDMLIMCLTSTDKHDLRKLWDDRFCSEATPMEYAEILDNLRSKYCLEH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3688 447 Pfam Tetratricopeptide repeat 124 152 IPR001440 GO:0005515
Prci3g3688 447 SMART tpr_5 120 153 IPR019734 GO:0005515
Prci3g3688 447 SMART tpr_5 154 186 IPR019734 GO:0005515
Prci3g3688 447 SMART tpr_5 187 220 IPR019734 GO:0005515
Prci3g3688 447 Gene3D Tetratricopeptide repeat domain 108 218 IPR011990 GO:0005515
Prci3g3688 447 Pfam Potential Monad-binding region of RPAP3 323 412 IPR025986 -
Prci3g3688 447 PANTHER OS05G0129900 PROTEIN 30 286 - -
Prci3g3688 447 SUPERFAMILY TPR-like 119 234 IPR011990 GO:0005515
Prci3g3688 447 ProSiteProfiles TPR repeat profile. 120 153 IPR019734 GO:0005515
Prci3g3688 447 Pfam Tetratricopeptide repeat 155 183 IPR019734 GO:0005515
Prci3g3688 447 ProSiteProfiles TPR repeat profile. 187 220 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3688 Prci-Chr3 46162560 46168304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3688 98 224 Calmodulin-binding Proteins AT3G25230 30.070 3.93e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3688 K23002 - gmx:100784528 560.451