Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3684 ATGGATTTCCAGGGATTCTTAAGTGACTTGCAGGATTGGGAACTTTCTCGGAAGGACAAAGCGCGGAAAATGACGTCACAAGCGCTGCAAAAGGAAAAAGTTGTGGCTGTGGAGACAGCTTCAAGAGGAGAAACTTTTTCATTTGATTTTACAAAAAGTATTTCAGGACAATATGATTTCTCAAGAAATAAAGATTCTTTTGATCATGTCCATGGTAGTCATACAACTGAAGATGTTCCCGATGCTGCTTCGGAAAAAGAACTGGGTAATGAATACTTCAAGCAGAAGAAGTTTAAGGAAGCTGTTGACTGCTATTCAAGAAGTATTGCCTTCTCTCCGACAGCTGTGGCATATGCAAATAAAGCAATGGCCTATATCAAACTCAGAAGATTCCAACAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTAGATGATCGTTACATAAAAGCATACTCACGTCGAGCAACAGCTAGAAAAGAACTTGGGAAACTTAAAGAATCAATGGAGGATGCTGAATTTGCTTTGCGCTTGGAACCTGAAAATCAAGAAATCAAGAAACAGTATGCTGATATCAAATCTTTGTATGAGAATGAAATTCTTCAGAAAACATCTGGAGCTCTGAGAAGCTCTGTACAGGGAACTCAAAAAGTGGGAAAGTCAGAGACAAATATTGATAGGGGAACCATCCATACTGTTCCGAATGGTACTGAAAAATCTGGGGCTGCTGACGTTCTAGATCACACGAAGAGATATGATGGAATTAACAAGCAAGAAATGAAGGCATCTGTTCAACATCTTGCTTCACGTGTAGCTTCTCGGGTCATGGCTGAAGCTGCAAAAAATATAACACCGCCAAATTCAGCTTATCAGTTTGAGGTCTCATGGAGAGGGTTTTCAGGTGACCCTGCCCTGAAGGCTCGTCTTTTAAAGGCTATGTCTCCTCAAGACTTACCAAAGATATTCAAAAGTGCCTTGTCTTCTGCGATACTTATGGACATCATAAAGTGTGTGGCATCCTTTTTCACTGAAGACACGGTTCTGGCTGTCAGTTTCTTAGAGCACTTGACCAAGGTTTCAAGATTTGACATGCTCATTATGTGTCTTACATCAACAGATAAGCATGATCTGCGCAAGCTCTGGGATGATAGGTTCTGTAGCGAGGCAACTCCAATGGAGTATGCAGAGATTCTTGACAACCTCCGATCCAAATACTGCCTTGAACATTGA 1230 0.413 MDFQGFLSDLQDWELSRKDKARKMTSQALQKEKVVAVETASRGETFSFDFTKSISGQYDFSRNKDSFDHVHGSHTTEDVPDAASEKELGNEYFKQKKFKEAVDCYSRSIAFSPTAVAYANKAMAYIKLRRFQQAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESMEDAEFALRLEPENQEIKKQYADIKSLYENEILQKTSGALRSSVQGTQKVGKSETNIDRGTIHTVPNGTEKSGAADVLDHTKRYDGINKQEMKASVQHLASRVASRVMAEAAKNITPPNSAYQFEVSWRGFSGDPALKARLLKAMSPQDLPKIFKSALSSAILMDIIKCVASFFTEDTVLAVSFLEHLTKVSRFDMLIMCLTSTDKHDLRKLWDDRFCSEATPMEYAEILDNLRSKYCLEH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3684 409 PANTHER OS05G0129900 PROTEIN 1 249 - -
Prci3g3684 409 SMART tpr_5 116 148 IPR019734 GO:0005515
Prci3g3684 409 SMART tpr_5 149 182 IPR019734 GO:0005515
Prci3g3684 409 SMART tpr_5 82 115 IPR019734 GO:0005515
Prci3g3684 409 Gene3D Tetratricopeptide repeat domain 70 180 IPR011990 GO:0005515
Prci3g3684 409 ProSiteProfiles TPR repeat profile. 82 115 IPR019734 GO:0005515
Prci3g3684 409 ProSiteProfiles TPR repeat profile. 149 182 IPR019734 GO:0005515
Prci3g3684 409 Pfam Tetratricopeptide repeat 117 145 IPR019734 GO:0005515
Prci3g3684 409 SUPERFAMILY TPR-like 81 196 IPR011990 GO:0005515
Prci3g3684 409 Pfam Tetratricopeptide repeat 86 114 IPR001440 GO:0005515
Prci3g3684 409 Pfam Potential Monad-binding region of RPAP3 285 374 IPR025986 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3684 Prci-Chr3 46162383 46168304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3684 60 186 Calmodulin-binding Proteins AT3G25230 30.070 3.10e-10 60.1