Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3677 ATGGCATCTTTGGAACCAATTGTGGATTCCACTAGCTCGGAAACACACCGGGAAGGCAATCAGAGAAAGCGTAGGAAAATCGGGCACGAATCCAGCAATGGTCATAAGCCGCTCGCTCCGTTTCCTTGGAGATCCGAGACGGAGCAGCGGATCTATTCCTCCAAGCTCGTCGAAGCTCTCCGCCGTGTTCTTCGCCAGAGTCCGTCTTCTGCGGCGAAACCTCGCCTCGGACGCGATGTTCGTGAGATCGCTGACAGAGTTCTAGCAGTGACGGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCTCTCAGTCGGAGAAAGTTCCATAGGCAGCACAAGAAGGTCAAGAAGGGAGTGAACGGGTTGAAGAAACCGGAGGTTAGCAGAGAGAGGAGGAGGCTGCCGACAGTACAGAGGAAAGCGCGAGTTCTTAGCCGGTTAGTTCCCGGTTGCCGGAAGGCTTCGCTTCCGAGTCTTCTGGAAGAAACCACTGATTATATTTCAGCCTTGGAAATGCAAGTGCGAGCCATGACAGCGCTCACCGAGCTACTCGGATGTGGCACGCCTGCCGATCGGCTCGGGCGGCCTCGACCGTGA 609 0.5649 MASLEPIVDSTSSETHREGNQRKRRKIGHESSNGHKPLAPFPWRSETEQRIYSSKLVEALRRVLRQSPSSAAKPRLGRDVREIADRVLAVTAKGRTRWSRAILASPLSRRKFHRQHKKVKKGVNGLKKPEVSRERRRLPTVQRKARVLSRLVPGCRKASLPSLLEETTDYISALEMQVRAMTALTELLGCGTPADRLGRPRP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3677 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
Prci3g3677 202 MobiDBLite consensus disorder prediction 1 42 - -
Prci3g3677 202 MobiDBLite consensus disorder prediction 124 138 - -
Prci3g3677 202 Gene3D - 120 189 IPR036638 GO:0046983
Prci3g3677 202 MobiDBLite consensus disorder prediction 11 27 - -
Prci3g3677 202 MobiDBLite consensus disorder prediction 110 138 - -
Prci3g3677 202 CDD bHLH_AtIBH1_like 133 185 IPR044549 GO:0006355
Prci3g3677 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Prci3g3677 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 192 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3677 Prci-Chr3 46104130 46105454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3677 43 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 54.140 3.83e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3677 - - pcin:129310330 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4300 1 57372889 57373944 Prci3g3677 3 46104130 46105454 CCT
Prci3g3677 3 46104130 46105454 Prci3g3677 3 46104130 46105454 ECH
Prci1g4300 1 57372889 57373944 Prci3g3677 3 46104130 46105454 ECH