Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3635 ATGGCAACGAAGCTGGTTTGGATAGCCATTATTGGTTTTGCTTGCCTCATTTCTGGGGTTATCTCCAGGGGATCTGAGACACATTCTGAGTTTTCTTACTTAGACAATGATTTCGTCGCAGCAAAAGCTTCCTCATCTGCCCAGCCTCTCGTTGTCGCCCTCACTCTCATTGAAGGAGCTGCTTCTAAGGGAGCTGTCTGTTTGGATGGAACGCTGCCTGGCTACCACTTGCATCGTGGGTTCGGATCTGGGGCAAATAGCTGGCTCATTCAACTTGAGGGTGGAGGGTGGTGTAATACCATCAAGAGTTGTGTTTTTAGAAAAACTACTCGTCGTGGTTCCTCAAAACACATGGAACATCAAATACCATTCACGGGAATTTTGAGCAACAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAATTACGGTACTGTGATGGGGCATCTTTCAGCGGGGACAGCGAGGACAAGACTGCACAACTTCAATTCAGAGGACAAAAAATATGGCTGGCTGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCTGACCAGGCCCTTCTTTCTGGATGCTCTGCTGGTGGCCTGGCATCCATAATACATTGTGATGAATTTCAGAGCTTGTTCCCTAAATCTACCAAAGTAAAATGTTTGGGCGATGCAGGGCTTTTTCTTGATGTAGTTGATGTATCTGGGGGACGCACATTAAGGAATCTGTTTGGAGGTGTTGTTAAATTGCAGGGAGTACAAAAAAATCTGCCGGAAAGGTGTCTTAACAAACTGGATCCAACTTCGTGCTTCTTTCCTCAGAATTTGATCAACGATGTTAAGACCCCTTTGTTTATACTCAATGCAGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCCCCGCCTTCAGCTGACCCCCATGGCTCTTGGAATAACTGCAAATCAAACCATGCAAATTGTAATTCATCTCAAATTCGGTTCCTCCAAGACTTCAGAAATCAAATGCTTAATGTTTTGAAGGGATTCTCACTGTCATCTCAAACTGGATTATACATAAACTCCTGTTTTGCTCATTGCCAATCTGAGAGACAGGATACATGGTTTGCTGATGACTCTCCCCTGATTAACAAGAAGTGA 1143 0.4462 MATKLVWIAIIGFACLISGVISRGSETHSEFSYLDNDFVAAKASSSAQPLVVALTLIEGAASKGAVCLDGTLPGYHLHRGFGSGANSWLIQLEGGGWCNTIKSCVFRKTTRRGSSKHMEHQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSEDKTAQLQFRGQKIWLAAMEELMSKGMQNADQALLSGCSAGGLASIIHCDEFQSLFPKSTKVKCLGDAGLFLDVVDVSGGRTLRNLFGGVVKLQGVQKNLPERCLNKLDPTSCFFPQNLINDVKTPLFILNAAYDAWQLQASLAPPSADPHGSWNNCKSNHANCNSSQIRFLQDFRNQMLNVLKGFSLSSQTGLYINSCFAHCQSERQDTWFADDSPLINKK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3635 380 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Prci3g3635 380 PANTHER NOTUM-RELATED 50 379 IPR004963 GO:0016787
Prci3g3635 380 Pfam Pectinacetylesterase 46 380 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3635 Prci-Chr3 45759713 45764791 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3635 4 380 Carbohydrate Esterase AT1G57590 66.053 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3635 K19882 - qsa:O6P43_007338 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4188 1 56750288 56754139 Prci3g3635 3 45759713 45764791 CCT
Prci1g4234 1 56951365 56955598 Prci3g3635 3 45759713 45764791 ECH
Prci3g3635 3 45759713 45764791 Prci1g4234 1 56951365 56955598 ECH
Prci3g3635 3 45759713 45764791 Prci3g3635 3 45759713 45764791 ECH