LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g3627	ATGGATCAAAGCCCTCATCCCCGTCGTGAATTGACCTTCTTGGGCTCCGGCGACTTGCTCCCCACGAATAATTCAGATCCGATAACAGAGAATCCCAGCGGCCCCCGCCATCCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCCGTTGACAAAAGCTGTGATTCTAGCCCGCCTCGGGATCCGGATCTTGACGACCGCCATGATGGACATGGATCGGTTCCTTCTGCTGTTCGGCCTGTAAACACCGGCCTAAATCTAACGCGTTTAAGTTATGGAACTTCAGAAGCAGCAAGTGATGAAAATCCTGATACCGAGCTCATTACAGTCCAAGGTGAATTACGAAGACTGCATGCAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTGCAAGCTCAGCTGTTCATCGCTTTGCAAAAACAAAACCCTATGAAGAAGGTCGAAGCAAATGGCATAGTGGCGGGGAAACAGTTGATGGACCCACAGCCATCTACCAATTTAGAGATTAATAATCCATCTATTTCCGATGATAAGACCCAATCTTCGGCGCCCTCAAACAATGCGGAGGTTATGTCAAACCAACGTGAACACCATTTGACTAAACTTCTTGGGAAGCGAGCTTGTCCTGAAGATGCTTTTGACCGCTCCTCTACTCAGAGTTGGGAGTCATCCATGAGCACCAAGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCGGATCAGGTCGCCTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCCGAAGCTCCTCTGATAAGTGATGGATGTCAATGGAGAAAATATGGTCAAAAAATGGCGAAGGGTAATCCTTGTCCCCGTGCTTATTATCGTTGCACTATGGCCGTAGGATGCCCAGTTCGTAAGCAGGTGCAAAGGTGTGCCGAGGACAAGACAGTGCTGATAACAACCTACGAAGGAAATCACAACCACCCCCTTCCTCCGGCAGCCACTGCAATGGCGAATACAACATCGGCGGCGGCGGCAATGCTCCTGTCCGGTTCAACCTCAAGTACGGGCAAGGAAGGCTTAACACCTTCAGCGGGATATATGTGTTCTATGGCCTACCCGTACGCATCTATGGCCACTCTGTCGGCGTCTGCACCATTTCCAACTATCACACTGGACTTGACCCAAGTCCACAGCGGTGGCTTGCAGCTGCAACGAGCACACCCCTCATCAGGGCCCCGTTTTCCTGTGCCAGTAATGCTGCATGGGTGTCCGCCGGGACAGCTCATAGCACATCCCATGTTGTTCCCGCAGAACAAGCTTCAAGTAGGGCAAAAGCTGCCCATGGTTGAGACGGTGAGCGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCACTGGCGGCTGCAATATCATCTATCATAGGGGCGTCCGGCAGCCGCGGAGCAGCAAGTAATAACACGGTTGCTTCACCTACCGGAGTTGCTATGAATACTAATAATCCAAATAATGCCTTTAACCCCATGCCTGTGCTGCCTGTCTCCCCGCAACTACCTCGTTCATGCACCACGCTCTCCACCAACTAG	1584	0.5082	MDQSPHPRRELTFLGSGDLLPTNNSDPITENPSGPRHPPIKEMDFFSRSVDKSCDSSPPRDPDLDDRHDGHGSVPSAVRPVNTGLNLTRLSYGTSEAASDENPDTELITVQGELRRLHAENRKLRTMLDQITKSYSQLQAQLFIALQKQNPMKKVEANGIVAGKQLMDPQPSTNLEINNPSISDDKTQSSAPSNNAEVMSNQREHHLTKLLGKRACPEDAFDRSSTQSWESSMSTKLQESKRSDEQVSDQVAFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSTGKEGLTPSAGYMCSMAYPYASMATLSASAPFPTITLDLTQVHSGGLQLQRAHPSSGPRFPVPVMLHGCPPGQLIAHPMLFPQNKLQVGQKLPMVETVSAAIASDPNLTAALAAAISSIIGASGSRGAASNNTVASPTGVAMNTNNPNNAFNPMPVLPVSPQLPRSCTTLSTN	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	221	244	-	-
	Prci3g3627	527	FunFam	probable WRKY transcription factor 31	254	331	-	-
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	17	31	-	-
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	165	203	-	-
	Prci3g3627	527	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	98	485	IPR044810	GO:0003700
	Prci3g3627	527	SMART	WRKY_cls	269	329	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	167	201	-	-
	Prci3g3627	527	SUPERFAMILY	WRKY DNA-binding domain	262	330	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g3627	527	Gene3D	WRKY domain	253	331	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g3627	527	ProSiteProfiles	WRKY domain profile.	264	330	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	41	73	-	-
	Prci3g3627	527	Coils	Coil	114	141	-	-
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	221	236	-	-
	Prci3g3627	527	MobiDBLite	consensus disorder prediction	1	82	-	-
	Prci3g3627	527	Pfam	WRKY DNA -binding domain	271	328	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g3627	Prci-Chr3	45685387	45688070	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g3627	42	486	WRKY Transcription Factor Family	AT1G62300	40.644	1.82e-87	278

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Prci3g3627		WRKY	5.5e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g3627	-		-	cill:122317500	431.795