Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3626 ATGGATCAAAGCCCTCATCCCCGTCGTGAATTGACCTTCTTGGGCTCCGGCGACTTGCTCCCCACGAATAATTCAGATCCGATAACAGAGAATCCCAGCGGCCCCCGCCATCCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCCGTTGACAAAAGCTGTGATTCTAGCCCGCCTCGGGATCCGGATCTTGACGACCGCCATGATGGACATGGATCGGTTCCTTCTGCTGTTCGGCCTGTAAACACCGGCCTAAATCTAACGCGTTTAAGTTATGGAACTTCAGAAGCAGCAAGTGATGAAAATCCTGATACCGAGCTCATTACAGTCCAAGGTGAATTACGAAGACTGCATGCAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGCCAACTGCAAGCTCAGCTGTTCATCGCTTTGCAAAAACAAAACCCTATGAAGTGGTTATCGAAACAGAAGGTCGAAGCAAATGGCATAGTGGCGGGGAAACAGTTGATGGACCCACAGCCATCTACCAATTTAGAGATTAATAATCCATCTATTTCCGATGATAAGACCCAATCTTCGGCGCCCTCAAACAATGCGGAGGTTATGTCAAACCAACGTGAACACCATTTGACTAAACTTCTTGGGAAGCGAGCTTGTCCTGAAGATGCTTTTGACCGCTCCTCTACTCAGAGTTGGGAGTCATCCATGAGCACCAAGTTACAAGAATCCAAGAGATCAGACGAACAAGTTTCGGATCAGGTCGCCTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCCGAAGCTCCTCTGATAAGTGATGGATGTCAATGGAGAAAATATGGTCAAAAAATGGCGAAGGGTAATCCTTGTCCCCGTGCTTATTATCGTTGCACTATGGCCGTAGGATGCCCAGTTCGTAAGCAGGTGCAAAGGTGTGCCGAGGACAAGACAGTGCTGATAACAACCTACGAAGGAAATCACAACCACCCCCTTCCTCCGGCAGCCACTGCAATGGCGAATACAACATCGGCGGCGGCGGCAATGCTCCTGTCCGGTTCAACCTCAAGTACGGGCAAGGAAGGCTTAACACCTTCAGCGGGATATATGTGTTCTATGGCCTACCCGTACGCATCTATGGCCACTCTGTCGGCGTCTGCACCATTTCCAACTATCACACTGGACTTGACCCAAGTCCACAGCGGTGGCTTGCAGCTGCAACGAGCACACCCCTCATCAGGGCCCCGTTTTCCTGTGCCAGTAATGCTGCATGGGTGTCCGCCGGGACAGCTCATAGCACATCCCATGTTGTTCCCGCAGAACAAGCTTCAAGTAGGGCAAAAGCTGCCCATGGTTGAGACGGTGAGCGCAGCCATTGCTTCTGATCCCAATTTGACTGCAGCACTGGCGGCTGCAATATCATCTATCATAGGGGCGTCCGGCAGCCGCGGAGCAGCAAGTAATAACACGGTTGCTTCACCTACCGGAGTTGCTATGAATACTAATAATCCAAATAATGCCTTTAACCCCATGCCTGTGCTGCCTGTCTCCCCGCAACTACCTCGTTCATGCACCACGCTCTCCACCAACTAG 1599 0.5072 MDQSPHPRRELTFLGSGDLLPTNNSDPITENPSGPRHPPIKEMDFFSRSVDKSCDSSPPRDPDLDDRHDGHGSVPSAVRPVNTGLNLTRLSYGTSEAASDENPDTELITVQGELRRLHAENRKLRTMLDQITKSYSQLQAQLFIALQKQNPMKWLSKQKVEANGIVAGKQLMDPQPSTNLEINNPSISDDKTQSSAPSNNAEVMSNQREHHLTKLLGKRACPEDAFDRSSTQSWESSMSTKLQESKRSDEQVSDQVAFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSTGKEGLTPSAGYMCSMAYPYASMATLSASAPFPTITLDLTQVHSGGLQLQRAHPSSGPRFPVPVMLHGCPPGQLIAHPMLFPQNKLQVGQKLPMVETVSAAIASDPNLTAALAAAISSIIGASGSRGAASNNTVASPTGVAMNTNNPNNAFNPMPVLPVSPQLPRSCTTLSTN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3626 532 MobiDBLite consensus disorder prediction 17 31 - -
Prci3g3626 532 Pfam WRKY DNA -binding domain 276 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3626 532 ProSiteProfiles WRKY domain profile. 269 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3626 532 SUPERFAMILY WRKY DNA-binding domain 267 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3626 532 MobiDBLite consensus disorder prediction 171 208 - -
Prci3g3626 532 MobiDBLite consensus disorder prediction 226 241 - -
Prci3g3626 532 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 490 IPR044810 GO:0003700
Prci3g3626 532 FunFam probable WRKY transcription factor 31 259 336 - -
Prci3g3626 532 MobiDBLite consensus disorder prediction 41 73 - -
Prci3g3626 532 SMART WRKY_cls 274 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3626 532 Coils Coil 114 141 - -
Prci3g3626 532 MobiDBLite consensus disorder prediction 226 249 - -
Prci3g3626 532 Gene3D WRKY domain 258 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3626 532 MobiDBLite consensus disorder prediction 1 82 - -
Prci3g3626 532 MobiDBLite consensus disorder prediction 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3626 Prci-Chr3 45685387 45688071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3626 42 491 WRKY Transcription Factor Family AT1G62300 40.241 1.01e-86 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g3626 WRKY 5.6e-24 CL0274