Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3622 ATGGGTGAGAATGGCTTGGAAGCAGATAATAAGGCAATCACATCAGAGAATCACGCAGAATGCAGCACAAACGAGGCAAACAGAGAGATGGTCAGGCAAAAAAGAAAAGTTGATAGAGTTCCATTTTACAGGCTCTTCTCGTTTGCGGATTCCACTGATACTCTCTTAATGATCGTCGGCACCATTGGGGCCATTGGAAATGGCATGGGTTTGCCTCTCATGACCTTACTGATGGGCCAAATGATCAACGCTTTTGGAAGTAACCAGCAAAGCACCGACATTGCTGCAAAAGTTTCCAAGGTCTCTTTGAAATTTGTGTACTTGGCAGTGGGATGCGGTGTGGCAGCATGTCTCCAGGTGTCTTGCTGGATGGTCACAGGGGAAAGACAGGCTGCACGAATAAGGGGTTTGTATCTGAAAACCATACTGAGACAGGACGTTGCTTTCTTCGATAAGGAGACGAACACTGGAGAGGTGGTGGGGAGAATGTCCGGTGACACTGTTCTCATACAAGATGCCATGGGAGAGAAGGTTGGGAAATTTCTGCAACTAATTTCAACATTCATTGGCGGCTTTGTGGTAGCATTTATCAAAGGATGGCTTCTTGCACTTGTCATGTTGTCCATTCTTCCATTGCTGGTGGTAGCCGGGGCATCCATGGCCTTCATTATAGGAAGGATGGCTTCCCGTGGTCAGACAGCTTATGCAAAAGCTGCAAATGTCGTTGAACAAACTCTTGGCTCTATTAGAACTGTGGCATCCTTCACAGGCGAAAAGCAAGCAGTGTCTACTTACAGCAAATTTCTTGTGGATGCTTACAGATCAGGAGTCCATGAAGGCGTTGTAGCCGGCCTGGGTTTCGGCATGGTTATGTTTGTCTTTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATATTGGAAAGAGGATACAACGGCGGCACGGTGATTAATGTGATTGTTGCTATATTAACTGCTTCCATGTCACTTGGGCAGGCCACCCCTTGCTTGAGTGCTTTTGCTGCGGGTCAAGCTGCAGCTTATAAAATGTTCGAGACAATTGAGAGAAAGCCTGAGATAGACGCTTATGATCCAGACGGTAAAGTATTAGAGGACATCAACGGCGAGATAGAGTTGAAAGATGTTTACTTTAGTTATCCAACTAGACCTGAGGAGCTAGTATTCAATGGGTTCTCTCTTCATATACCAAGTGGCGCCACCTCTGCCTTGGTTGGAGAGAGTGGAAGTGGGAAGTCAACAGTTATTAGCTTAATAGAAAGATTCTATGATCCACAGGCAGGTGAAGTTCTTGTTGATGGCGTCAACTTGAAAGAACTTCAGCTCAGATGGATTAGAGGTAAAATCGGCCTTGTCAGCCAGGAGCCTGTGTTGTTTGCATCGAGCATTATGGATAACATCGTGTATGGAAAGGAGGGAGCGACAATTGAAGAGATAAGAGCTGCAGCTGAACTCGCAAATGCTGCCAAGTTCATTGATAAATTGCCACAGGGATACGACACAATGGTTGGCGAACATGGAACTCAGCTATCTGGTGGACAGAAACAACGTATTGCTATTGCAAGAGCAATTATAAAAGATCCAAGAATACTCCTTCTAGATGAAGCGACAAGTGCATTGGATGCAGAATCTGAAAGGATAGTTCAAGAGGCTCTAGATAGGGTCATGGTGAACCGAACAACCGTTATTGTGGCTCATAGATTGAGCACAGTGAGGAATGCTGATATGATTGCTGTGATTCATAGGGGGAAGATGGTTGAAAAAGGAACGCATTCAGAGCTTCTCAAGGATCCTGAGGGAGCTTACTCTCAGCTTATACGCTTGCAAGAAGTAAACAAAGAGTCAGAAGAATCTTCAGAGCGTCAAAACAGAAGTGAAATTTCCCTAGAATCGTTCAGACAATCAAGCCAAAGGAGGTCACTTCGGAGATCTATAAGTCGAGGATCGTCTGTCGGCAATAGTAGCAGGCACTCATTTTCAGTACCATTCGGCATGCCCACTGTAGTTAACGTCCCTGAACCTGAGCTTGAAAAATTAGACGCGAAAAAAGAATTGCCAGAGATTCCAATTCTCCGCCTTGCTTCCCTCAACAAGCCTGAAATTCCAGTGCTTCTGCTTGGATGCGTGGCTGCCATTATAAATGGTGCAATACTTCCGGTGTTTGGTTTGTTGGTTTCTTCTGTTATCAAAACATTCTACGAGCCCCCTCATGAGATGAAAAAGGATTCCAAGTTTTGGGCAATTGTTTTTTTGGCCCTTGGCATTGCATCTCTTCTCGCAATTCCATCCCGAGGATACTTGTTCTCTGTAGCTGGCTGTAAGTTAATCCAACGCATCAGAATGATGTGTTTTGAGAAGGTTGTGAACATGGAGGTTGGTTGGTTTGATGACCCAGAGCACTCAAGCGGAGTAATAGGTGCAAGGCTTTCGGCAGATGCTTCGACAGTGCGAGCCCTTGTTGGTGATGCGCTAGGTCTTCTGATTCAAAATGCAGCTTCCATGTTGACAGGTTTAGTTATTGCTTTCATTGCGAGCTGGGAGTTAGCTTTAATTATTCTGGTACTTATTCCCCTGATTGGGGTGAATGGATATATTCAAATGAAATTCATGAAGGGTTTTAGTGCAGATGCAAAGATGATGTACGAAGAAGCAAGTCAAGTAGCTAATGATGCTGTTGGAAGCATCCGAACAGTGGCTTCTTTCTGTGCCGAAGAGAAGGTAATGGAACTGTACAGGAAGAAATGCGTAGGCCCCATGAAATCTGGGATAAGGCTAGGCTTGATCAGTGGAGCAGGATTTGGGTGTTCGTTTTTCTTACTTTTTAGTGTCTATGCTGCAAGTTTCTATGCCGGAGCTAGGCTTGTGGATGCTGGCAGAACTAATTTCTCAGACGTTTTTCGGGTTTTCTTTGCTCTAACAATGGCGGCAATGGCAGTTTCCCAGTCGAGCTCTATGGCTCCGGATTCTAGCAAAGCCAAGTCTGCCACTTCTTCCATATTTGATCTAATCGACGGGAAGTCCAAGATAGACTCCAGCGACGAGTCCGGCGCCACGATGGATAACGTAAAGGGAGAAATTGAGCTCCGTCATATAAGCTTCAAATATCCATCCAGACCAGATACACAAATTTTCCGGGACCTCAATCTGGCTATCCACTCGGGCAAGACAGTGGCCCTCGTTGGCGAGAGTGGAAGCGGGAAATCCACGGTGATTGCATTGCTCCAAAGATTTTATGACCCAGACTCAGGGGAGATCACGCTTGATGGAATAGAAATTCGAACGTTACAGATCAAGTGGTTAAGACAGCAGATGGGGCTCGTGAGCCAAGAACCAGTGTTGTTCAATGACACTGTCCGTGCCAACATTGCCTACGGAAAAGGAGGCGATGCAACAGAAGCGGAAGTCACAGCTGCAGCAGAACTGGCCAACGCTCACAAGTTCATCAGTGGCTTACACCAGGGTTATGAGACGGTAGTGGGGGAGAGGGGACTCCAGTTGTCTGGGGGCCAGAAACAGAGGGTGGCCATAGCACGCGCCATAATCAAGAGTCCAAAGATATTACTGCTAGACGAGGCCACGAGTGCGTTGGATGCCGAGTCAGAGCGAGTGGTTCAAGATGCATTAGACAAAGTGATGGTGAATCGGACTACTGTGGTGGTAGCGCATCGTCTGTCCACCATAAAGAATGCGGATGTGATTGCCGTCGTCAAGAACGGAGTCATAGTAGAGAAAGGAAGGCATGAGACGCTGATTAACATTCAAGATGGCTTCTATGCGTCCCTAGTCCAGCTTCATACTAGTGCTTCCACTGCATGA 3843 0.4627 MGENGLEADNKAITSENHAECSTNEANREMVRQKRKVDRVPFYRLFSFADSTDTLLMIVGTIGAIGNGMGLPLMTLLMGQMINAFGSNQQSTDIAAKVSKVSLKFVYLAVGCGVAACLQVSCWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFIGGFVVAFIKGWLLALVMLSILPLLVVAGASMAFIIGRMASRGQTAYAKAANVVEQTLGSIRTVASFTGEKQAVSTYSKFLVDAYRSGVHEGVVAGLGFGMVMFVFFCGYALAVWFGAKMILERGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIERKPEIDAYDPDGKVLEDINGEIELKDVYFSYPTRPEELVFNGFSLHIPSGATSALVGESGSGKSTVISLIERFYDPQAGEVLVDGVNLKELQLRWIRGKIGLVSQEPVLFASSIMDNIVYGKEGATIEEIRAAAELANAAKFIDKLPQGYDTMVGEHGTQLSGGQKQRIAIARAIIKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKESEESSERQNRSEISLESFRQSSQRRSLRRSISRGSSVGNSSRHSFSVPFGMPTVVNVPEPELEKLDAKKELPEIPILRLASLNKPEIPVLLLGCVAAIINGAILPVFGLLVSSVIKTFYEPPHEMKKDSKFWAIVFLALGIASLLAIPSRGYLFSVAGCKLIQRIRMMCFEKVVNMEVGWFDDPEHSSGVIGARLSADASTVRALVGDALGLLIQNAASMLTGLVIAFIASWELALIILVLIPLIGVNGYIQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCVGPMKSGIRLGLISGAGFGCSFFLLFSVYAASFYAGARLVDAGRTNFSDVFRVFFALTMAAMAVSQSSSMAPDSSKAKSATSSIFDLIDGKSKIDSSDESGATMDNVKGEIELRHISFKYPSRPDTQIFRDLNLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRTLQIKWLRQQMGLVSQEPVLFNDTVRANIAYGKGGDATEAEVTAAAELANAHKFISGLHQGYETVVGERGLQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIQDGFYASLVQLHTSASTA 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3622 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 616 IPR003439 GO:0005524
Prci3g3622 1280 MobiDBLite consensus disorder prediction 620 636 - -
Prci3g3622 1280 Pfam ABC transporter 399 547 IPR003439 GO:0005524
Prci3g3622 1280 Gene3D - 1025 1279 IPR027417 -
Prci3g3622 1280 FunFam ABC transporter B family member 1 1025 1275 - -
Prci3g3622 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 345 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g3622 1280 Pfam ABC transporter 1054 1203 IPR003439 GO:0005524
Prci3g3622 1280 MobiDBLite consensus disorder prediction 637 667 - -
Prci3g3622 1280 MobiDBLite consensus disorder prediction 620 667 - -
Prci3g3622 1280 SUPERFAMILY ABC transporter transmembrane region 701 1013 IPR036640 GO:0005524|GO:0016020
Prci3g3622 1280 CDD ABC_MTABC3_MDL1_MDL2 1035 1273 - -
Prci3g3622 1280 FunFam ABC transporter B family member 9 44 376 - -
Prci3g3622 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 618 IPR027417 -
Prci3g3622 1280 SMART AAA_5 407 599 IPR003593 GO:0016887
Prci3g3622 1280 SMART AAA_5 1062 1255 IPR003593 GO:0016887
Prci3g3622 1280 ProSitePatterns ABC transporters family signature. 1175 1189 IPR017871 GO:0005524|GO:0016887
Prci3g3622 1280 CDD ABC_MTABC3_MDL1_MDL2 380 618 - -
Prci3g3622 1280 Pfam ABC transporter transmembrane region 713 986 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g3622 1280 Pfam ABC transporter transmembrane region 57 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g3622 1280 CDD ABC_6TM_Pgp_ABCB1_D1_like 57 341 - -
Prci3g3622 1280 Gene3D - 378 635 IPR027417 -
Prci3g3622 1280 MobiDBLite consensus disorder prediction 1 27 - -
Prci3g3622 1280 PANTHER ABC TRANSPORTER B FAMILY 23 620 IPR039421 -
Prci3g3622 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 714 1000 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci3g3622 1280 ProSitePatterns ABC transporters family signature. 519 533 IPR017871 GO:0005524|GO:0016887
Prci3g3622 1280 FunFam ABC transporter B family member 1 693 1001 - -
Prci3g3622 1280 SUPERFAMILY ABC transporter transmembrane region 44 367 IPR036640 GO:0005524|GO:0016020
Prci3g3622 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1025 1273 IPR027417 -
Prci3g3622 1280 FunFam ABC transporter B family member 1 370 619 - -
Prci3g3622 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1035 1272 IPR003439 GO:0005524
Prci3g3622 1280 CDD ABC_6TM_Pgp_ABCB1_D2_like 703 1018 - -
Prci3g3622 1280 Gene3D ABC transporter type 1, transmembrane domain 103 1009 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3622 Prci-Chr3 45646874 45652915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3622 33 1279 Calmodulin-binding Proteins AT2G36910 44.612 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3622 K05658 - gmx:100800034 1993.01