Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3617 ATGAGCAGAAAAGTGATTGTGCCTGCTGTTTCCATCATCCTCGTGGTGGGTGTGGCCCTCGCAGTTGTCGGCGTCGTCCACTACAAGAGCAATAACAGCAACGATGGTCAGCCACAGACCAACACCCACACAAAGGCCGTTGCAGCCATATGCCAAACTTCCGACGACCAGCAGCTCTGCCACAACACGCTCGACCCCGTCAACAGCACCGACCCTAAGGATTATATAAAGGCGGTGGTGGAATCCGCCATGAACACCGTCATACAGTCCTTTAATCTCACAGACAGGGTTGCCGTAGAGCACGGAAATGGAACCACGAGAGGCATCAAGATGGCCATCGAGGATTGCCAGGACTTGTTGCAATCTGCGATAGCGGAACTGCAAGCATCGGGCGTGCTCGTTCAGGACAACAATGCTCGAAGCGTCACTGACCGGGAAGATGACCTCAAGAACTGGTTGAGCGCCGTCATCGCCTACCAGCAATCCTGTCTCGATGGGTTTTCGACGGACGACGATGGCGAGAAGGCGATTCAGCAACAATTGCAAACAGGTGGCCTGGACAACGTGGAGAAGCTCACAGGGCTGGCACTGGATGTTGTGGCGGGCATTTCCCAGTTTCTCTCCGTCTTGGACTTGGACTTGGACGTGAAACCTGCTTCTCGTCGCCTTCTGAACACGGTGGATGTGAATTACGACGGCTATCCCACCTGGATGTCCAACAACGATCGCAAGCTCATCGAGCTCCCCAACACCGGACATCCCGTGGATCAGCCCAACGCAGTAGTTGCCCAGGACGGCAGTGGCCAGTTCAAGACCATCCAAGAAGCCATCAACTCTTACCCACCAAAATTCGAAGGCAGATTCACCATTTACGTCAAGGCCGGTACCTATAATGAAATCGTCCACATTACCAAGAAGACGCCCAACATTCTCATCTACGGTGATGGCCCCGCAAAGACCATCGTCACCGGCAACAGGAGCTACACCTCCGGCTGGAAAACCATCAAAACTGCCACCTTCACCACCTTGGCTGACGGCTTCATTGCCAAGTCGATGGCATTCGAGAACACCGCCGGGCCTGAAGGACATCAAGCAGTTGCACTGAGGGTGATGGGCGATCGCTCAGCGTTCTTCGACTGTGCCATGCACGGTTACCAAGACACCTTGTACGCCCACGCCAAACGTCAATTCTACCGCAATTGTGAGATCTCCGGCACAGTGGACTTCATCTTCGGATACGGCAGCACCTTGATCCAAAACTCCAGGATCATTGTCAGGAAGCCCATGGATAACCAGCAAAACATCGTCGTCGCCGACGGCACTGCACAAAAGCAAATGCGCACGGGAATTGTCCTCCAGAACTGCCAGATCATGGCCGACGCCAGCCTCACCCCCGACAGGTTGACAGTGAAGTCATACCTGGCCAGACCATGGAAGGCATACTCCAGGGCTATCTTCATGGAAAGTGAAATCGGCGACCTCATCAACGCCGACGGGTTTCTTCCATGGATGGGCAACTTGTTCCTGGACACCTGCTTCTTCGCCGAGTACGCGAACACCGGTCCTGGTGCCGCCACAAACAGCAGGGTCAAGTGGAGCCACGGCGTCCTCTCCAAGGCTGATGCTACTCAATACACCGCCGAACCTTGGCTTCAGGCGGGCGCCTGGTTGCCCACCACCGGCATTGCCTTCGACAGTGGTCTCACCAAAGCTTAA 1716 0.5507 MSRKVIVPAVSIILVVGVALAVVGVVHYKSNNSNDGQPQTNTHTKAVAAICQTSDDQQLCHNTLDPVNSTDPKDYIKAVVESAMNTVIQSFNLTDRVAVEHGNGTTRGIKMAIEDCQDLLQSAIAELQASGVLVQDNNARSVTDREDDLKNWLSAVIAYQQSCLDGFSTDDDGEKAIQQQLQTGGLDNVEKLTGLALDVVAGISQFLSVLDLDLDVKPASRRLLNTVDVNYDGYPTWMSNNDRKLIELPNTGHPVDQPNAVVAQDGSGQFKTIQEAINSYPPKFEGRFTIYVKAGTYNEIVHITKKTPNILIYGDGPAKTIVTGNRSYTSGWKTIKTATFTTLADGFIAKSMAFENTAGPEGHQAVALRVMGDRSAFFDCAMHGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLIQNSRIIVRKPMDNQQNIVVADGTAQKQMRTGIVLQNCQIMADASLTPDRLTVKSYLARPWKAYSRAIFMESEIGDLINADGFLPWMGNLFLDTCFFAEYANTGPGAATNSRVKWSHGVLSKADATQYTAEPWLQAGAWLPTTGIAFDSGLTKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3617 571 CDD PMEI-like_3 49 204 - -
Prci3g3617 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 203 IPR035513 -
Prci3g3617 571 SMART PMEI_2 42 199 IPR006501 GO:0004857
Prci3g3617 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 200 IPR035513 -
Prci3g3617 571 Gene3D - 255 568 IPR012334 -
Prci3g3617 571 NCBIfam pectinesterase inhibitor domain 18 195 IPR006501 GO:0004857
Prci3g3617 571 PANTHER PECTINESTERASE 16 558 - -
Prci3g3617 571 Pfam Plant invertase/pectin methylesterase inhibitor 46 198 IPR006501 GO:0004857
Prci3g3617 571 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Prci3g3617 571 Pfam Pectinesterase 259 552 IPR000070 GO:0030599|GO:0042545
Prci3g3617 571 SUPERFAMILY Pectin lyase-like 257 566 IPR011050 -
Prci3g3617 571 FunFam Pectinesterase 254 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3617 Prci-Chr3 45610817 45613000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3617 1 568 Carbohydrate Esterase AT2G47030 40.232 2.48e-137 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3617 K01051 - gmx:100820142 711.835