Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3616 ATGAGTGGGAAAGTAATAATCTCTGCAGTTTCCCTAATCCTCGTCGTGGGGGTTGCCATCGGCACCATCGTGGTGGTGCACAAGCAGAATGGCGATTCTGGTCAAATCTCTTCCCATCAAAATGCCGTGGCTGAGATGTGCCAGAACTCCGACGACCCAAAGTTTTGCCAACAGACTCTCAGCCATGTGAATGACACCTCTGACCCAAAGGCTTTCCTGGCCACCGTAGTGGAAGCAACCACCAACAGCGTCATCAAGGCCCTGAACATGAGCGACAGGCTCATCGTGGATCACGGCAATGGCCAGAATGGCGTTAAGATGGCCCTTGAGGACTGCAAGGACCTGCTCCAATTTGCCATGGACAGCCTCCAGTTTTCCACTGACTTATTACGCAACGACATCAAAACTGTTACCGCCCAAACCCCAGACTTTAGGAACTGGCTCTCCGCCGTCATCTCCTACCAGCAGGCCTGCATGGACGGCTTTGACGACAACAACGACGGCGAGAAACAGGTCAAGTCACAGTTGCAGCAGCAAGGGTTGGACGACATGGGAAAGATAACCGGCATAGCCCTGGACATGGTCGCCAATCTGGCCAAGATCCTTGACAAGTTCGGGTTGCACCTGGACGTGAAACCTGCTTCCCGCCGCCTTATGGAGGTGGACAGCGAAGGTTATCCCACATGGTTCTCGGCTTCCGACCGCAAGCTCTTGCAGAAGATGCGGAGGGGACATCATGTGAAACCCAACGTTGTGGTGGCTAAGGATGGCAGCGGCAACTTCAAGACCATTGCAGAGGCCATCGCCTCCTATCCCAAGAACGGCCTAGGGCCAAATGGCAGATACGTGATCTTCGTCAAGGCAGGCGTATATCCAGAGTACATCATCGTCCCCAAATCTGCAGTGAATATCCTTATGTATGGTGAGGGAGCAGCCAAAACCGTCATCACCGGAAACAAAAACTTTGTGGATGGTGTCAAGACAATGCAAACAGCTACCTTCGCCAACACTGCAACTGGGTTCATCGCCAAGTACATGTCATTTGTGAACAGCGCTGGTCCTGAGAAGCACCAGGCAGTGGCACTGAGGAACCAAGGAGATATGTCGGCTTTCTTTGATTGCGCCATCGTGGGTTACCAAGATACCTTGTACGCTCAAACCAATCGCCAATTCTACAGGAACTGCGACATCTCTGGTACTATTGACTTCATCTTCGGGGTGTCGCCGACATTGATCCAGAACTCTAGAATCGTTGTGAGGAAGCCACTGGACAACCAATTCAACACAGTGACGGCAGACGGGACAAGCCAGAAGAATATGCCCACTGGAATTGTGATCCAAAACTGCGATATCGTGCCAGAGCCAGCTCTCTTCCCTGTCAGGTTCCAATTGATGTCTTACTTGGGAAGGCCATGGAAGGCTTACTCAAAGACTGTGGTAATGGAATCCAGAATCGGTGATGTCATTCACCCCGATGGATGGATTCCTTGGGAGGGAAGCATGTATCTCGACACATTGTACTATGCTGAGTACAACAACGTAGGACCCGGAGCTAATGTTCAAAGAAGGGTCAAGTGGCCAGGTTACAAGGGCCTGATCAGCAAGAACGAAGCTGTCCAATTCACAGCCGGCCAATTCCTCAAGGGTGGACCCACCTCCGATTCTGCAGTTTGGTTGAAGGCTCTTCACGTTCCTTTTGACCTTGGCTTCACCAAGCCATGA 1722 0.5174 MSGKVIISAVSLILVVGVAIGTIVVVHKQNGDSGQISSHQNAVAEMCQNSDDPKFCQQTLSHVNDTSDPKAFLATVVEATTNSVIKALNMSDRLIVDHGNGQNGVKMALEDCKDLLQFAMDSLQFSTDLLRNDIKTVTAQTPDFRNWLSAVISYQQACMDGFDDNNDGEKQVKSQLQQQGLDDMGKITGIALDMVANLAKILDKFGLHLDVKPASRRLMEVDSEGYPTWFSASDRKLLQKMRRGHHVKPNVVVAKDGSGNFKTIAEAIASYPKNGLGPNGRYVIFVKAGVYPEYIIVPKSAVNILMYGEGAAKTVITGNKNFVDGVKTMQTATFANTATGFIAKYMSFVNSAGPEKHQAVALRNQGDMSAFFDCAIVGYQDTLYAQTNRQFYRNCDISGTIDFIFGVSPTLIQNSRIVVRKPLDNQFNTVTADGTSQKNMPTGIVIQNCDIVPEPALFPVRFQLMSYLGRPWKAYSKTVVMESRIGDVIHPDGWIPWEGSMYLDTLYYAEYNNVGPGANVQRRVKWPGYKGLISKNEAVQFTAGQFLKGGPTSDSAVWLKALHVPFDLGFTKP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3616 573 CDD PMEI-like_3 46 200 - -
Prci3g3616 573 Gene3D - 244 570 IPR012334 -
Prci3g3616 573 Pfam Pectinesterase 250 549 IPR000070 GO:0030599|GO:0042545
Prci3g3616 573 SUPERFAMILY Pectin lyase-like 246 555 IPR011050 -
Prci3g3616 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 198 IPR035513 -
Prci3g3616 573 FunFam Pectinesterase 244 570 - -
Prci3g3616 573 SMART PMEI_2 38 194 IPR006501 GO:0004857
Prci3g3616 573 PANTHER PECTINESTERASE 14 560 - -
Prci3g3616 573 NCBIfam pectinesterase inhibitor domain 32 194 IPR006501 GO:0004857
Prci3g3616 573 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Prci3g3616 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Prci3g3616 573 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3616 Prci-Chr3 45605898 45607946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3616 1 570 Carbohydrate Esterase AT2G47030 38.953 6.39e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3616 K01051 - gmx:100775246 770.385