Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3615 ATGAGAGGGAAAATAATTGTGTCCGCGGTTTCTCTCATCCTTGTGGTGGGGGTGGCGATCGGCGCCGTTGTGGTGGTTCACAACAAGAACAAAGACCCTCAGATCTCGGAACGTCAGAATGCGGTGAAGGCCATGTGCCAGAACACGGACGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCAGAACAGCTCAGACCCGAAAGCATTCTTAGCCGCCGCCGTGGAAGCCTCCGCCAACAGCGTGATCAGGGCATTGAACATGAGCGATAAGCTCATCGTCGAAAAGGGCAACAGCTCTCAAGGCGTCGTCAAGATGGCCCTCGACGACTGCAAGGACTTGCTCCAATTCGCCATGGACAGCCTCCAGGCTTCCACTGACTTCCTGCATAACAACAGCGTCCAAACCCTGAGCGACCGGTCCCCTGACTTCAAGAATTGGCTTGCTTCTGTCGTGTCCTACCAACAGGCTTGCTTGGATGGGTACGAAGACAATGTCGACGGCGCCAAAGAGATCAAGTCTCAGCTTCAAGAGAATGGTTTGGACGACGCGGGGAAGCTCACCGGCATAGCCCTCGACATTATGGCTAATCTCGAAAGCATCCTGAGTCAGTTCGGGTTGAAGGTGCAAGTGAACCCTGGCTCTCGCCGTCTTCTGGAGCTGGACAGCCAAGGCTATCCCACATGGTTCTCGGCTGCCGATCGCAGGCTCTTGGCCAACGTAAACAGGGTAAGGGGACATCACATCAAGCCCAACGTGGTGGTGGCCCAGGATGGCAGCGGCCAGTTCAAGACCATCATGGCGGCCGTTAACTCTTATCCTAAGGGTTTCCAAGGAAGATATATCATCCTCGTCAAGGCTGGTACTTATCGCGAGTACGTCGTCATTCCGAAGACCGCCGTCAATATCCTCATGTACGGTGAGGGCACTGATAAAACCATCGTCACCGGTAACAGAAACAATGTTGATGGTTACACCACATCGAATACGGCTACTTTCGTCAATACTGCGAACGGGTTCATCGCCAAGTACATGACATTCGTGAACACCGCCGGTCCTGAAATGCACCAAGCAGTGGCATTTAGGAACCAGGGAGACATGTCGGGTTTATTCGATTGTTCTTTCGTGGGTTACCAGGACACGTTGTACGCTCAAACCAACCGTCAATTCTACAGGAACTGCGACATCTCCGGTACAGTTGACTTTATCTTTGGAGTGTCGACCACGTTGATCCAGAGCTCTCGAATCATCGTGAGGAAGCCAATGGACAACCAGTTCAACACAGTGACGGCAGACGGCAGAACGCAGAAGAATCTACCCACCGGAACTGTGATCCAGAACTGCGATATCGTTCCGGAGAATGCTCTGTTTCCCGTCAGGTTTCAGATCAGATCCTACCTGGGAAGGCCGTGGAAGGAGTATGCTAGAACTGTGGTAATGGAGTCCAGAATAGGTGACTTGATTCAACCCGATGGGTGGACTCCTTGGGCAGGAAGCTTGTACCTCAACACACTGTACTATGCTGAGTACAACAACGTGGGACCTGGTGCTAATGTTGCGAAGAGGGTTAAGTGGCCAGGTTACAAGGGCCTCATCAGTAGGAATGAGGCTGCTCAGTTCACCGCTGGCCAGTTCCTCAAAGGTGGGTCCACTTCCCGAACTGAGGACTGGATGAAGCCCCTTCACGTTCCTTTCGACATTGGCTTCACTAAGCCCTGA 1722 0.5285 MRGKIIVSAVSLILVVGVAIGAVVVVHNKNKDPQISERQNAVKAMCQNTDDQKLCHDTLGNVQNSSDPKAFLAAAVEASANSVIRALNMSDKLIVEKGNSSQGVVKMALDDCKDLLQFAMDSLQASTDFLHNNSVQTLSDRSPDFKNWLASVVSYQQACLDGYEDNVDGAKEIKSQLQENGLDDAGKLTGIALDIMANLESILSQFGLKVQVNPGSRRLLELDSQGYPTWFSAADRRLLANVNRVRGHHIKPNVVVAQDGSGQFKTIMAAVNSYPKGFQGRYIILVKAGTYREYVVIPKTAVNILMYGEGTDKTIVTGNRNNVDGYTTSNTATFVNTANGFIAKYMTFVNTAGPEMHQAVAFRNQGDMSGLFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTTLIQSSRIIVRKPMDNQFNTVTADGRTQKNLPTGTVIQNCDIVPENALFPVRFQIRSYLGRPWKEYARTVVMESRIGDLIQPDGWTPWAGSLYLNTLYYAEYNNVGPGANVAKRVKWPGYKGLISRNEAAQFTAGQFLKGGSTSRTEDWMKPLHVPFDIGFTKP 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3615 573 NCBIfam pectinesterase inhibitor domain 35 178 IPR006501 GO:0004857
Prci3g3615 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Prci3g3615 573 SUPERFAMILY Pectin lyase-like 249 565 IPR011050 -
Prci3g3615 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 199 IPR035513 -
Prci3g3615 573 SMART PMEI_2 37 195 IPR006501 GO:0004857
Prci3g3615 573 FunFam Pectinesterase 247 570 - -
Prci3g3615 573 Gene3D - 247 570 IPR012334 -
Prci3g3615 573 Pfam Pectinesterase 253 549 IPR000070 GO:0030599|GO:0042545
Prci3g3615 573 FunFam Pectinesterase 38 200 - -
Prci3g3615 573 Coils Coil 160 180 - -
Prci3g3615 573 CDD PMEI-like_3 44 199 - -
Prci3g3615 573 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Prci3g3615 573 PANTHER PECTINESTERASE 16 560 - -
Prci3g3615 573 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3615 Prci-Chr3 45599100 45601243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3615 1 570 Carbohydrate Esterase AT2G47030 40.331 3.83e-138 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3615 K01051 - gmx:100775246 758.059