Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3601 ATGGTGGCCGAAGCAGACCTTACGTGTCAACGGAGCAACCCTGTGTTGGATGTTCAGTATTTGCCTAACGGGGCAAATATACGTGAGATCGAAGATGCCGCCGCCATCACGCCTCCGAGTTTTGACAGAGTTCGTGCTTCTCCATTAGTGTCTGCCGAGTTACTCAGCCCACAAGAAGATATTAAAGCTGCTGACAGAATATCAAATGATGCTCTTGATTCTGCTGTTCTTCAATTTGTCCCTAGCATCCGCTCCGGCAGTTTTGCCAACATTGGCCCCCGGAGATACATGGAAGATGAACATATAAAGATAGATGATCTATCTTCTCACATGGGATCACTATATACATTTCCTGAACCAAGTGCCTTCTACGGGGTGTTTGATGGTCATGGAGGACCTGAAGCTGCAGCTTATATCCAGAAAAATGTTATGAGATTCTTCTTTGAAGATGTTAGCTTCCCCCAGACATCTGAAGTAGATAATGTTTTTTTAAAAGAGGCGGAGAACTCCCTCAGAAAATCATTTCTATTGGCTGACTTAGCTTTGGCTGATGATTGCAGTGTGAGCAACTCATCAGGGACCACGGCTCTTATTGCCTTGATATTTGGAAGGCGTCTAATGGTGGCCAATGCTGGTGATTGCCGAGCAGTTCTCTGTCGTAAAGGAGAGGCAATTGACATGTCTCAAGATCACAGGCCTGTTTATCCTTCAGAGCGGAGGCGAGTTGAGGAATTAGGTGGTCACGTAGATGATGGTTATCTTAACGGGGTTTTGTCAGTTTCTCGAGCCCTTGGGGACTGGGATATGAAGTTTCCACGTGGTTCTCCCTCACCTTTGATTGCAGAGCCTGAGTTTCGTCAAGTGGTTATAACAGAGGATGATGAGTTCCTTATCATAGGTTGTGATGGAATTTGGGATGTTATGACAAGTCAGCAGGCAGTTAGCCTTGTCCGTAGAAGCCTGAGGCGGCATTATGACCCAGAGCGATGTGCCAGGGATCTGGTCATGGAGGCACTACGCCTTAACACGTTTGATAATCTTACAGTGATTGTTGTGTGCTTTTCTTCTAATTCTATTGATCACAGCGAGCCATCCCCTTCTCATCAGAGGAAATTGAGGTGCTGTAGCCTTTCTGCAGAGGCGCTTTGTAGCTTGAGGAACTTTTTGGAAGGCAATGCAAGCAATTGA 1188 0.4613 MVAEADLTCQRSNPVLDVQYLPNGANIREIEDAAAITPPSFDRVRASPLVSAELLSPQEDIKAADRISNDALDSAVLQFVPSIRSGSFANIGPRRYMEDEHIKIDDLSSHMGSLYTFPEPSAFYGVFDGHGGPEAAAYIQKNVMRFFFEDVSFPQTSEVDNVFLKEAENSLRKSFLLADLALADDCSVSNSSGTTALIALIFGRRLMVANAGDCRAVLCRKGEAIDMSQDHRPVYPSERRRVEELGGHVDDGYLNGVLSVSRALGDWDMKFPRGSPSPLIAEPEFRQVVITEDDEFLIIGCDGIWDVMTSQQAVSLVRRSLRRHYDPERCARDLVMEALRLNTFDNLTVIVVCFSSNSIDHSEPSPSHQRKLRCCSLSAEALCSLRNFLEGNASN 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3601 395 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Prci3g3601 395 SUPERFAMILY PP2C-like 79 355 IPR036457 -
Prci3g3601 395 FunFam Probable protein phosphatase 2C 22 68 357 - -
Prci3g3601 395 ProSiteProfiles PPM-type phosphatase domain profile. 84 354 IPR001932 -
Prci3g3601 395 Gene3D - 73 362 IPR036457 -
Prci3g3601 395 SMART PP2C_SIG_2 99 354 IPR001932 -
Prci3g3601 395 Pfam Protein phosphatase 2C 88 346 IPR001932 -
Prci3g3601 395 CDD PP2Cc 83 354 IPR001932 -
Prci3g3601 395 PANTHER PROTEIN PHOSPHATASE 2C 78 352 IPR015655 GO:0004722|GO:0006470
Prci3g3601 395 SMART PP2C_4 74 352 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3601 Prci-Chr3 45528315 45531428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3601 97 391 PP2C-type Phosphatase Gene Family AT3G62260 68.919 2.39e-150 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3601 K14803 - gmx:100785388 634.024