Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3600 ATGGCGTCAGGGGGTGCAGCACATGCTTCTAAGTTAATAGATGTAAACGCAAAAACAAATGGCATTGATAGGTTGCCTGCCGAGATGAATGACATGAAAATTAGGGACGACAAGGAAATGGAAGCAATTGTTATAGATGGAAACGGGACTGAAACAGGACATATAATTGTCACCACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGACAATAAGCTACATGGCTGAGCATGTTATTGGGCATGGATCTTTTGGAGTAGTTTTCCAGGCGAAGTGCTTAGAGACGGGTGAAACTGTGGCTATAAAAAAAGTTCTTCAAGACAAGAGGTACAAGAACCGAGAACTGCAAACCATGCGTCTTCTTGACCACCCTAACATCGTATCTTTGAAGCATTGTTTCTTTTCAACAACTGAAAAAGAGGAACTTTACCTGAACTTGGTATTAGAGTATGTTCCTGAGACTCTCCATCGGGTCATCAGACACTATAATAAAATGAATCAAAGGATGCCGCTGATATATGTCAAACTTTATTTTTACCAGATATGTAGAGCACTTGCTTACATTCACAACAGTATTGGAGTTTGTCACAGGGACATAAAACCTCAAAATCTACTGGTTAATCCTCACACGCAGCAGCTGAAGCTATGTGATTTTGGAAGTGCAAAAGTGTTGGTAAAAGGGGAACCGAACATATCATACATCTGTTCTAGGTACTATAGAGCTCCTGAGCTCATCTTTGGCGCTACTGAGTACTCTACAGCCATTGATATCTGGTCTGCTGGTTGCGTACTTGGTGAACTATTGCTTGGTCAGCCTCTCTTTCCTGGCGAGAGTGGAGTAGATCAGCTTGTTGAAATTATCAAGGTTTTAGGTACACCGACAAGGGAAGAAATCAAGTGCATGAATCCTAATTACACAGAATTCAAATTCCCGCAAATTAAAGCTCATCCTTGGCACAAGATCTTTCACAAACGTATGCCATCTGATGCTGTGGATCTTGTCTCAAGACTACTACAGTACTCTCCCAATCTTCGAAGCACAGCTTTCGAGGCTCTTGTTCATCCATTCTTTGATGAGCTGCGTGACCCAAACACTCGGTTGCCAAACGGGCGTTTCCTCCCCCCGCTCTTCAACTTCAAGGCAAATGAGCTCAAGGGAGTGCCTGCTGAGATGCTGGTGAAGCTTATTCCCCCACATGCAAGAAAGCAATGTGCTTTGTTTGGGGCATGA 1230 0.4325 MASGGAAHASKLIDVNAKTNGIDRLPAEMNDMKIRDDKEMEAIVIDGNGTETGHIIVTTIGGKNGQPKQTISYMAEHVIGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNIVSLKHCFFSTTEKEELYLNLVLEYVPETLHRVIRHYNKMNQRMPLIYVKLYFYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTQQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYSTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPSDAVDLVSRLLQYSPNLRSTAFEALVHPFFDELRDPNTRLPNGRFLPPLFNFKANELKGVPAEMLVKLIPPHARKQCALFGA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3600 409 Gene3D Transferase(Phosphotransferase) domain 1 153 401 - -
Prci3g3600 409 SUPERFAMILY Protein kinase-like (PK-like) 72 382 IPR011009 -
Prci3g3600 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Prci3g3600 409 ProSitePatterns Protein kinases ATP-binding region signature. 79 103 IPR017441 GO:0005524
Prci3g3600 409 FunFam Glycogen synthase kinase-3 beta 57 152 - -
Prci3g3600 409 Pfam Protein kinase domain 74 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3600 409 FunFam Shaggy-related protein kinase kappa 153 401 - -
Prci3g3600 409 CDD STKc_GSK3 68 360 IPR039192 -
Prci3g3600 409 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 37 403 - -
Prci3g3600 409 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g3600 409 Gene3D Phosphorylase Kinase; domain 1 57 152 - -
Prci3g3600 409 SMART serkin_6 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3600 Prci-Chr3 45511768 45516059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3600 79 364 MAP Kinase Gene Family AT3G45640 35.593 4.79e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci3g3600 Pkinase 4.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3600 K27413 - qsa:O6P43_007300 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3600 3 45511768 45516059 Prci3g3600 3 45511768 45516059 ECH