Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3585 ATGGCACCCAAAACTCTCATCCAAGTTACCCTGCTGCTGCTTTCATTTTTACGCTGCTCTTGCGAGCCCTCTTGGAACTCAGAGAAGCGTACAGATTATGAGAACTGGATTTCCTGGAACCTCAAGAATTACCGAAAGGCGACACTTTTGAAGACCCAATGGAATGTTAAAGCGCCTGATTCGAAGCCGGGGATGGCCGGGAATAACACAGTTAAAATCAATGTTCGCCAAGACGACAGTGGTGACTTCAACACCATTAGACAAGCGCTGGACAGCATTCCGCCACGCAACATTAGGAGGGTTATCGTGTCGATCGGACCTGGTGTTTACAGGGAGAAGATCGTGATACCCAGAAATATGGAGTTCATAACATTGATAGGCGACGCTACGAAGCCGCCAACTATTACAGGGAACGATACGGCGGCCGTCATCGGAAGGGATGGGATGCCGTTCGGCACATTCCACAGTGCCACCGTTGCCGTCGATGCTAATTATTTTGTTGCCGTCAACATCAAATTTGAGAACACGGCGTCGCACGAGGTGGGAAAGGCGGGAGAACAAGCCGTAGCAGTTCGTGTCTCGGGGACCAAAGTTGCATTTTACAACTGCAGCTTCTATGGGGATCAAGACACCCTCTACGACCATAGAGGACTTCACTACTTCAATAATTGCTTCATCCAAGGCTCTGTTGATTTCATCTTCGGCTCCGGCAGATCCCTTTACGAGAACTGTTATCTAAATTCAATAGCCAAGAAGGCGGTGTCCATCACGGCTCAAAAGCGCACGAATGCGTCGTTAGAAAGCGGGTTTTCGTTTAAGAGTTGCGTGATAACGGGAAGTGGACGAGCTTATCTGGGAAGAGCGTGGGGCGATTACTCCAGAGTTGTTTTCTCTTACACCTTCATGGACAAGATTATTGTGCCCCAAGGCTGGAGTGACTGGGGTGACCAAAAGCGCGACTCGAGAGTGTATTATGGTGAATACAGGTGCAGTGGGCCTGGGGCTAACTTGACAGGAAGGGTAGCATGGGCGCACATACTCACCGACCAAGAGGCTCAGCCATTTCTTGGAACCCACTACATTGAAGGCGACACTTGGCTTGTTCCCCTCCCCAATTGA 1119 0.4996 MAPKTLIQVTLLLLSFLRCSCEPSWNSEKRTDYENWISWNLKNYRKATLLKTQWNVKAPDSKPGMAGNNTVKINVRQDDSGDFNTIRQALDSIPPRNIRRVIVSIGPGVYREKIVIPRNMEFITLIGDATKPPTITGNDTAAVIGRDGMPFGTFHSATVAVDANYFVAVNIKFENTASHEVGKAGEQAVAVRVSGTKVAFYNCSFYGDQDTLYDHRGLHYFNNCFIQGSVDFIFGSGRSLYENCYLNSIAKKAVSITAQKRTNASLESGFSFKSCVITGSGRAYLGRAWGDYSRVVFSYTFMDKIIVPQGWSDWGDQKRDSRVYYGEYRCSGPGANLTGRVAWAHILTDQEAQPFLGTHYIEGDTWLVPLPN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3585 372 FunFam Pectinesterase 68 369 - -
Prci3g3585 372 Gene3D - 67 370 IPR012334 -
Prci3g3585 372 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 67 367 - -
Prci3g3585 372 Pfam Pectinesterase 73 364 IPR000070 GO:0030599|GO:0042545
Prci3g3585 372 ProSitePatterns Pectinesterase signature 2. 226 235 IPR033131 -
Prci3g3585 372 SUPERFAMILY Pectin lyase-like 73 368 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3585 Prci-Chr3 45409716 45411683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3585 73 369 Carbohydrate Esterase AT5G47500 43.478 1.62e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3585 K01051 - qsu:112011696 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g3585 3 45409716 45411683 Prci3g3585 3 45409716 45411683 ECH