Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3558 ATGGATGGTGCTGTCTCGCCTGAACTTGAGTCAGAAGCATCTCCAGAGCTCACACCAGAAGTTCGAGAATCTAAGAAGAGGAAAATGGTGGAGAAAACAGTTGTGAGGGTGAGAGTTGGAGAGAATGTCAGTAAAGTGAAGAATGAAGGGCCACCATCGGACTCATGGTCTTGGAGGAAATACGGACAAAAGCCTATTAAAGGATCTCCTTATCCGAGAGGCTATTACAGGTGCAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGATGCAGAACGGACGCTTCGATGCTCATCGTCACCTACACTTGTTCCCATAACCATCCAGCTCCAGAATCACGCTCCACCGCTCAACAATTCAAAGAATCAAGAACTCAAACCACCCAAGATCTCCCACCTCCTACTTCAAAGGCGGAAGACAAGGACCAGGAGGAAGAGAAGAAAGATCTCCAGCTTATGACAGCTAGTGATCGAGGTGCAAATGAAGAGAATTTTCGTTACTTGAAATCCCCGATAGGCTGTTCTGAAGATATTATTATCGACCACGAGGATCCTTTCGAACTGAACTCAGAGAAAACCCATGAGAGGATAGATCTTCTCTTGGAGGAAGAGCCCCCATGTTGTTCTCAGCTCAAGAACCTCTCAACACTGAAATCGGAAGAACTTGACTTTTTCGACGAGCTCGAAGAGCTACCCATGTCTCCGTCTTTGTTGAACTTTATGAGGAACAATTTTTCCGGCGAAAGGATTCCGGTTGCCCCGTCATGA 774 0.4651 MDGAVSPELESEASPELTPEVRESKKRKMVEKTVVRVRVGENVSKVKNEGPPSDSWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIVTYTCSHNHPAPESRSTAQQFKESRTQTTQDLPPPTSKAEDKDQEEEKKDLQLMTASDRGANEENFRYLKSPIGCSEDIIIDHEDPFELNSEKTHERIDLLLEEEPPCCSQLKNLSTLKSEELDFFDELEELPMSPSLLNFMRNNFSGERIPVAPS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3558 257 MobiDBLite consensus disorder prediction 108 158 - -
Prci3g3558 257 MobiDBLite consensus disorder prediction 137 155 - -
Prci3g3558 257 MobiDBLite consensus disorder prediction 108 136 - -
Prci3g3558 257 MobiDBLite consensus disorder prediction 1 27 - -
Prci3g3558 257 ProSiteProfiles WRKY domain profile. 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3558 257 FunFam WRKY transcription factor 65 32 113 - -
Prci3g3558 257 SUPERFAMILY WRKY DNA-binding domain 48 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3558 257 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3558 257 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g3558 257 Gene3D WRKY domain 37 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g3558 257 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 20 240 IPR044810 GO:0003700
Prci3g3558 257 MobiDBLite consensus disorder prediction 45 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3558 Prci-Chr3 45265453 45267169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3558 25 125 WRKY Transcription Factor Family AT3G58710 61.538 6.71e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g3558 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3558 - - gmx:100127368 317.005