Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g3556 ATGTCTGAGGAGGAGAACAGAGACGTCGAACTTGCTCAATTTCTCCTCACTGCAGAGGAGAGAAAAATTATCTACTATGTCTCTCGAGCACTGCGAGAGAGGATTCACAAGGAAAAAGGAATGATATCAACACTTGATGGATATAAGAAAACCGAAAGGCATGAGTTCCTTGGGAAGATCGATTCCAGTTTATCTTTTGTATCCACGTGCTTTCAAAAGACTCCATTCAGACAAGTGATGCAAATAACCAGCATACAAGCTATCACGGAGCACCTTGCGTCAGGGACGAAAATCCATGTAATTGATCTTGAAATCAGGTGTGGAGTGCAATGGACAGCTCTGATGCAAGCGTTGGTCGGACGTCGGGAAAGGCCCCTTCAGCTTCTCAAGATTACTGCTATTGGATTCAGGGGCAGAATCGAGCTAGGAGAGACAAGCGAGTGCTTAGCCAATTTTGCAGAATCCTTAAACCTGCCCTTCTCGTTTAAGGCTGTTTTTGTGACGGACATGATCGAAATCAAAGAACAACACATTGAGGTCGATGACGATGAAGCCGTAGCGGTGTATGCTCCGTACGTTCTATCGACCATGATACCGATGCCAGAGTGCTTGGAAAACTTGATGAGCATGAGGAAAAAGAAACCGTGTATAATGGCAATACTTGAAAGTTGA 672 0.4464 MSEEENRDVELAQFLLTAEERKIIYYVSRALRERIHKEKGMISTLDGYKKTERHEFLGKIDSSLSFVSTCFQKTPFRQVMQITSIQAITEHLASGTKIHVIDLEIRCGVQWTALMQALVGRRERPLQLLKITAIGFRGRIELGETSECLANFAESLNLPFSFKAVFVTDMIEIKEQHIEVDDDEAVAVYAPYVLSTMIPMPECLENLMSMRKKKPCIMAILES 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g3556 223 Pfam GRAS domain family 20 222 IPR005202 -
Prci3g3556 223 ProSiteProfiles GRAS family profile. 1 223 IPR005202 -
Prci3g3556 223 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 222 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g3556 Prci-Chr3 45257504 45258259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g3556 21 222 GRAS Transcription Factor Family AT1G66350 27.451 1.23e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci3g3556 GRAS 2.3e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g3556 - - pcin:129305649 438.343